Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy9g0424 | ATGGATTGCTTGGTAAGTATGCTGTCAGGTGGAGAATTGTTGGTCTGGGTTTTCTTGAAGAAGGAGCAAGCTATTCGAAGGCTCGATTGGGAAAAGCTTGGTGAGTTGAGTGCTTCCAAAGACAGTGAACTCTTTAGAGATTTGAACCTCAAACTTCTCATACGAGAGCACCGTCAACTCAGCCTTCATGGCCCTTTACGCCTTTTCCGCCGTCTTAATCTGCTAGGTCGTCGTCGGCTACCGAATGGCCTTCGGCGATCAGCTGCTTCCACTGTGGGTCAAAGCTACCTAATCAACCAAGCCAACATCCCTGAAAGTGGCCACACGAGCAACGACGGAAGAGTAACGCCGAGAATCGAGCCCAATGTTCCGATGGCTTCGCTCGTGTATTTCCAGTTCACCTTCACTGCGATTACTGTGATTTTACTTGCAGGCTTTGTTCTTGCGAGAATGAACATCAAAGCCTTGATGGCGTTCGTTCTTCTCTGGGTGATTTTCTCCTACACTGTCGGCGCCTTCACGATTTGGGGCGGAGGGTTTCTCTTTCAGTGGGGCGTGATCGATTATTCCAGCGACTACGTGATCCATCTTTCTTCGGGGATTTCTGGTCTGACCGTCGCTTATTGGGTTGGGCCGAGGATTAAGAGTGACAGAGAGAGGTTTCCGCCGAATAACATGCTGCTAATGTTGGCCGGAGCGAGGCTGCTGTGGATGGGGTGGTCGGGATTTAACGACGGCGCGCTGCACTCGGCGAACGTGGTGGCGTCGATAGCTGTGCTGAATACGAACGTGAGCGCGGCGACGAGCCTGCTGGTGTGGACCATTTTGGATGTGGTTTACTTTGGGAAGCCATCTGTTTTATTAAAAAAAGAAGAAGAAGAAGAAAGTGGAAAAACAAAAGTGCCACCGGCGGCTGACGGGGTCGGCACCGGTCACCGGTCGCCGGAGTTAAAGAAAAAGGATGGTGGTTGA | 972 | 51.23 | MDCLVSMLSGGELLVWVFLKKEQAIRRLDWEKLGELSASKDSELFRDLNLKLLIREHRQLSLHGPLRLFRRLNLLGRRRLPNGLRRSAASTVGQSYLINQANIPESGHTSNDGRVTPRIEPNVPMASLVYFQFTFTAITVILLAGFVLARMNIKALMAFVLLWVIFSYTVGAFTIWGGGFLFQWGVIDYSSDYVIHLSSGISGLTVAYWVGPRIKSDRERFPPNNMLLMLAGARLLWMGWSGFNDGALHSANVVASIAVLNTNVSAATSLLVWTILDVVYFGKPSVLLKKEEEEESGKTKVPPAADGVGTGHRSPELKKKDGG | 323 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 11830104 | 11832216 | + | Maker00004562 | Lcy9g0424 | 641540 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy9g0424 | 323 | PRINTS | Rhesus blood group protein signature | 258 | 280 | IPR002229 | GO:0005886(InterPro) | |
Lcy9g0424 | 323 | PRINTS | Rhesus blood group protein signature | 132 | 148 | IPR002229 | GO:0005886(InterPro) | |
Lcy9g0424 | 323 | PRINTS | Rhesus blood group protein signature | 227 | 245 | IPR002229 | GO:0005886(InterPro) | |
Lcy9g0424 | 323 | PANTHER | AMMONIUM TRANSPORTER MEP2 | 94 | 287 | IPR001905 | GO:0005886(PANTHER)|GO:0008519(PANTHER)|GO:0008519(InterPro)|GO:0016020(InterPro)|GO:0072488(PANTHER)|GO:0072488(InterPro) | |
Lcy9g0424 | 323 | Pfam | Ammonium Transporter Family | 125 | 287 | IPR024041 | GO:0008519(InterPro)|GO:0016020(InterPro)|GO:0072488(InterPro) | |
Lcy9g0424 | 323 | SUPERFAMILY | Ammonium transporter | 113 | 287 | - | - | |
Lcy9g0424 | 323 | Gene3D | Ammonium transporter AmtB like domains | 85 | 288 | IPR029020 | - | |
Lcy9g0424 | 323 | MobiDBLite | consensus disorder prediction | 291 | 323 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy5g0077 | Lcy-Chr5:845300 | Lcy9g0424 | Lcy-Chr9:11830104 | 1.07E-120 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy9g0424 | K03320 | - | csv:101207321 | 337.806 |