Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy9g0745 | ATGTCGGAAGAATCTGTGGCTGTTCTGCATATTCAGTACCCAGAATGGCCTGACCATGGGGTTCCTACTGACACACTTGCTGTTCGTAAAATGTTGAAGAGGCTGTATCACTTACCTCCCGATCTTGGCCCGATAGTGGTGCACTGCAGTGCAGGCATTGGAAGAACCGGAACATATTGCACAATTCATAACACAATTCAGAGAATCCTTACCGGAGACATGTCTGCTTTAGATCTTGTCAGTACCATTTCCACATTTAGGTCCCAGCGAATTGGAATGGTTCAAACACTGCAGCTGTGCTTCCAGGAAGTTCATTTTCTTGAGCAGCCGATTATGATCACTGTTCATTCTGGTCACGGATCCTGTCTTTTTAACTTAGAAGCATATAGAATTAGTGGATTAGAGATAAAAATGCCATTAGCTCTAAGATTAACTTACAAATTTAATCCATATTTAGAGGGAATGGAATCTGGATTACTGGGAATCCTTGACTGTAATCTAGATTACCGGGAATCCTGA | 519 | 42.2 | MSEESVAVLHIQYPEWPDHGVPTDTLAVRKMLKRLYHLPPDLGPIVVHCSAGIGRTGTYCTIHNTIQRILTGDMSALDLVSTISTFRSQRIGMVQTLQLCFQEVHFLEQPIMITVHSGHGSCLFNLEAYRISGLEIKMPLALRLTYKFNPYLEGMESGLLGILDCNLDYRES | 172 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 25455910 | 25461044 | + | Maker00009529 | Lcy9g0745 | 641861 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy9g0745 | 172 | Pfam | Protein-tyrosine phosphatase | 4 | 98 | IPR000242 | GO:0004725(InterPro)|GO:0006470(InterPro) | |
Lcy9g0745 | 172 | PRINTS | Protein tyrosine phosphatase signature | 77 | 92 | IPR000242 | GO:0004725(InterPro)|GO:0006470(InterPro) | |
Lcy9g0745 | 172 | PRINTS | Protein tyrosine phosphatase signature | 6 | 23 | IPR000242 | GO:0004725(InterPro)|GO:0006470(InterPro) | |
Lcy9g0745 | 172 | PRINTS | Protein tyrosine phosphatase signature | 44 | 62 | IPR000242 | GO:0004725(InterPro)|GO:0006470(InterPro) | |
Lcy9g0745 | 172 | PANTHER | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE | 4 | 98 | IPR050348 | GO:0004725(PANTHER) | |
Lcy9g0745 | 172 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 26 | 101 | IPR000387 | GO:0016311(InterPro) | |
Lcy9g0745 | 172 | Gene3D | Protein tyrosine phosphatase superfamily | 1 | 112 | IPR029021 | - | |
Lcy9g0745 | 172 | ProSiteProfiles | PTP type protein phosphatase domain profile. | 1 | 98 | IPR000242 | GO:0004725(InterPro)|GO:0006470(InterPro) | |
Lcy9g0745 | 172 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 3 | 98 | IPR029021 | - | |
Lcy9g0745 | 172 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 47 | 57 | IPR016130 | GO:0016311(InterPro) | |
Lcy9g0745 | 172 | SMART | ptp_7 | 7 | 108 | IPR003595 | - |
Pathway information
