Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy9g0989 TTCATGCGAAGGCCCATCAAGGATTACTCTAGTGGTGAAGATTGTCTGGTTGTAGAATGTTCAAAACCAGGGCATGTTCCATCGTTGCAGCATCTTTTGGTCTTCGGCTTATTTTTGAAGAAGATGGTACCTTCGGGGCCATCCACTCCCATTGGTGGTGCGCAGTCTGTTTCACCATCGCTTTTGAGATCAAATTCTGGAATGATGGGAGCACAAGGGGGGCTGCCTTCTCAGTCAGCTTTTCCTTCTCTTGTATCCCCACGGACTCAGTTTAGTAGTATGAATATGCTTGGTAATATGCCCAGTATGTCTTCCCTCCTTAATCAGTCATTTGGGAATGGAGTTCCGAATTCTGGGCCCTCAGGTATTGGAAACAGCCAACGAGGAGGTATGGACCCTGGTTCTGAGTCAGATCCCTTTTCACTTGTAGGCAATGGTGTGAACTTCAATAATACTCCATCGTCATTGGTGGCATCAAATACGGTAAACCCTGGTTCATCTAGTCAAGTTTCAGGGCCACAATTTTCAAACCATTCTAGCAGCCAAATAATACCCAATCAACAGCAGCATCAGCAAATTGAACCCCAGAACTTCCAACATAATCAGCATTCGATGCAACAGTTTGCTACCTCTAATAACACACAGCAGTCACAGCAACAGCAGCAACAACAACAACAACATCAATTCCAACCTATTCGAGGAAGCTTATGTGGTGTTGGACCTGTCAAGTTAGAGCCTCAAATGAACAATAATGATCTTCAAGGGCAGCAACTACAGCAGCAGCAGCAGTTGCAGTCAATGAGGAATCTTGGTCCTGTGAAACTGGAACAGCAACAACTTCAATCAATGAGAAACTTGGGTCCTGTGAAATTGGAACCTCAACAGTCTGATCAGTCATTGTACCTACAGCAGCAACATCAACAGCAACAGCAACAGCAACAGTTACTCAGTATGTCTAGGCAGTCGTCTCAGGCTGCTGCAGCACAGATTAATCTTTTGCAACAACAAAGACTCTTGCAATTTCAACACCAACAGCAACTCCTGAAGGCTATACCTCAGCAAAGACCGCATTTGCCTCAACAATTTCAACAACAAAATTTGCCATTGAGATCCCCTGTAAAACCAGTTTATGAACCTGGCATGTGTGCTCGACGTTTAACAAATTATATGTACCAACAACAGCACAGGCCTGAAGACAACAATATTGAGTTCTGGAGGAAATTTGTTGCGGAGTACTTTGCTCCCCATGCAAAAAAGAAATGGTGTGTTTCCATGTATGGAAATGGTCGCCAAACAACTGGTGTATTTCCACAGGATGTTTGGCATTGTGAAATATGCAACCGCAAGCCTGGTCGAGGTTTTGAAGCAACTTTTGAAGTTCTTCCGAGACTGTTCAAAATCAAGTATGAAAGTGGAACTCTCGAAGAGCTTCTCTATGTTGATATGCCTCGTGAATATCATAATTCATCTGGACAAATTGTTCTAGATTACGCAAAGGCAATACAAGAAAGCGTTTTTGAGCAACTTCGTGTTGTTCGTGATGGGCAACTTCGAATAGTTTTTTCTCCAGACTTAAAGATATGCTCTTGGGAATTTTGTGCTCGACGTCATGAAGAGCTTATTCCTCGGAGGTTACTAATACCTCAGGTTAGTCAGCTGGGGGCAGCTGCTCAGAAGTATCAGACTGCTATTCAAAATGCATCATCTAACTTGTCTACTCCAGAGTTGCAGAATAATTGCAACATGTTTGTAGGCTCAGCTAGACAATTGGCCAAGGCATTGGAAGTGCCATTAGTAAATGACTTGGGATATACAAAGAGATATGTCCGGTGCCTTCAGATATCAGAAGTCGTCAATAGTATGAAGGACTTGATCGATTACAGCCAAGAAACTACGACTGGCCCAATTGAGAGTTTGGCCAAGTTTCCACGGAAGACAAATGCTTCACTAGGCTTCCACAACCAAGCTCAAAATACCGAGCAACAATTACCCCAGCCCCAGCAAACAATTGATCAAAACACAAACGGCGACCAAAGCTCTGTTCAGGCTGCTGCTATGCAGCTTGCTGCTACCAATGGTGTTCCGAGTGCAAACAACAACGCTAATAATCCAGCATCAACATCATCTTCTGCTAGTACCATTGTTGGGTTACTCCACCAGAATTCCATGAACTCCAGACAGCAGAACTCTATCAATAGCGCTGGCAGCCCATATGCTGGGAATTCTGCACAAATATCGTCCCCAGGTTCCTCCACCACGATTGCTCAGGCACAAGCAAACTCCGCCTTCCAATCACCTGCATTATCCTCACCTAACAATCCCCCACAGTCATCAATTGGCACAGCAACAACGACTAATCACATGAGTGCCACCAATTCTCCGGCAAATGTCTCCTTGCAACAGCCAACACACTCTTCTGAAGCGGATCAAAACGATTCCCAGAGTTCCGTGCAAAAGATTATTCAAGAATACATGATGTCGAACCAACTAAACGGGATGAACACGATGACTGGTGTCTCCTCTCTAGGAGATGATGTGAAAAATGTCAACGGGATGTTGCCAACAAACAATATTATGAGTCTCAATGGTCGGAACTGCCTCGTTGGGAGTGGAACTGCTAATAGTGTTTCTGGTATGAGGAATGCGGGATATGGCTCAATGGGTGGAGGACTTGCACAGGCTTCTATGGTCAATGGAATGAAGTCTGCAATGGGAAGTAACTCGATTTCGAATGGGAGAATCGGGATGGCGTCATTGGCTCGAGAACAGAGTATAAATCATCAAGATTTGGGGGACCAGCTTCTTAATGGACTTGGAGCAGTGAATGGATTTAATAATCTTCAATTCGATTATTGA 2856 44.26 FMRRPIKDYSSGEDCLVVECSKPGHVPSLQHLLVFGLFLKKMVPSGPSTPIGGAQSVSPSLLRSNSGMMGAQGGLPSQSAFPSLVSPRTQFSSMNMLGNMPSMSSLLNQSFGNGVPNSGPSGIGNSQRGGMDPGSESDPFSLVGNGVNFNNTPSSLVASNTVNPGSSSQVSGPQFSNHSSSQIIPNQQQHQQIEPQNFQHNQHSMQQFATSNNTQQSQQQQQQQQQHQFQPIRGSLCGVGPVKLEPQMNNNDLQGQQLQQQQQLQSMRNLGPVKLEQQQLQSMRNLGPVKLEPQQSDQSLYLQQQHQQQQQQQQLLSMSRQSSQAAAAQINLLQQQRLLQFQHQQQLLKAIPQQRPHLPQQFQQQNLPLRSPVKPVYEPGMCARRLTNYMYQQQHRPEDNNIEFWRKFVAEYFAPHAKKKWCVSMYGNGRQTTGVFPQDVWHCEICNRKPGRGFEATFEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQTAIQNASSNLSTPELQNNCNMFVGSARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSQETTTGPIESLAKFPRKTNASLGFHNQAQNTEQQLPQPQQTIDQNTNGDQSSVQAAAMQLAATNGVPSANNNANNPASTSSSASTIVGLLHQNSMNSRQQNSINSAGSPYAGNSAQISSPGSSTTIAQAQANSAFQSPALSSPNNPPQSSIGTATTTNHMSATNSPANVSLQQPTHSSEADQNDSQSSVQKIIQEYMMSNQLNGMNTMTGVSSLGDDVKNVNGMLPTNNIMSLNGRNCLVGSGTANSVSGMRNAGYGSMGGGLAQASMVNGMKSAMGSNSISNGRIGMASLAREQSINHQDLGDQLLNGLGAVNGFNNLQFDY 951
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 32984450 32993711 - Maker00017588 Lcy9g0989 642105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy9g0989 951 MobiDBLite consensus disorder prediction 105 132 - -
Lcy9g0989 951 MobiDBLite consensus disorder prediction 658 680 - -
Lcy9g0989 951 MobiDBLite consensus disorder prediction 105 229 - -
Lcy9g0989 951 PANTHER LIM DOMAIN-BINDING PROTEIN 276 947 IPR029005 GO:0000122(PANTHER)|GO:0005634(PANTHER)|GO:0005667(PANTHER)|GO:0045944(PANTHER)
Lcy9g0989 951 MobiDBLite consensus disorder prediction 141 229 - -
Lcy9g0989 951 Pfam LIM-domain binding protein 385 639 IPR029005 -
Lcy9g0989 951 MobiDBLite consensus disorder prediction 723 816 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy11g0199 Lcy-Chr11:2383979 Lcy9g0989 Lcy-Chr9:32984450 4.31E-41 dispersed
Lcy6g0188 Lcy-Chr6:1695857 Lcy9g0989 Lcy-Chr9:32984450 4.37E-81 transposed
Lcy10g1306 Lcy-Chr10:35943322 Lcy9g0989 Lcy-Chr9:32984450 2.46E-288 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy9g0989 - - - 0.0