Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy9g1066 ATGGCCGACGATTACCCCGATAAGAACATCCTCCAGAGCACTGCTCTTCTCAAGTATATACTGGAAGCCAACGCCTATCCAAGAGAGCATCAACAGTTGAAGGAACTCAGAGAAACCACCTACCACAAGTTCGCCAAGCCAAAGAAAGTGATCGGTGTACCGGCGGATCAAGGATTGTTTCTATCGATGCTTTTGAAATTGATGAACGCAAAGAAAACTATAGAGCTCGGTGTTTTCACCGGCTATTCTCTCCTCACCACTGCGCTTGCACTGCCTGCTGACGGCCAGATAACAGCCATTGATATGAATAGAGAATCATTCGAAATTGGTTTGCCATTTATCAAGAAGGCGGGAGTTGATCATAAAATCAATTTTGTGGAATCTCAAGCATTGGTTGCCCTGAATGACCTCCTCAATGATGGCAGAGAAGGAGAATTTGATTTTGCATTTGTGGATGCCAACAAATCAGAGTTCATAAAATATCACGAGTTGCTTATAAAATTAGTGAAGGTTGGTGGAGTAATTGCCTATGATAACACCCTCTGGTATGGAAATGTGGTGCTGAGGGACGATCTTATCCATGAAGATTTTAAAGCTAATGCAACTCATATTCGAGAGCTTAATGCTTTTCTAGTCAATGACTCACGTGTGGAGATATCTCTCATCTCTATTGGAGATGGCCTCACTCTATGCAGGCGTATTCAATAG 708 42.8 MADDYPDKNILQSTALLKYILEANAYPREHQQLKELRETTYHKFAKPKKVIGVPADQGLFLSMLLKLMNAKKTIELGVFTGYSLLTTALALPADGQITAIDMNRESFEIGLPFIKKAGVDHKINFVESQALVALNDLLNDGREGEFDFAFVDANKSEFIKYHELLIKLVKVGGVIAYDNTLWYGNVVLRDDLIHEDFKANATHIRELNAFLVNDSRVEISLISIGDGLTLCRRIQ 235
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 34474792 34479546 - Maker00017833 Lcy9g1066 642182
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lcy9g1066 235 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 9 234 IPR002935 GO:0008171(InterPro)
Lcy9g1066 235 Gene3D Vaccinia Virus protein VP39 2 235 IPR029063 -
Lcy9g1066 235 Pfam O-methyltransferase 25 234 IPR002935 GO:0008171(InterPro)
Lcy9g1066 235 PANTHER O-METHYLTRANSFERASE-RELATED 7 234 IPR050362 GO:0008757(PANTHER)
Lcy9g1066 235 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 16 233 IPR029063 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy3g1119 Lcy-Chr3:36171050 Lcy9g1066 Lcy-Chr9:34474792 3.04E-79 dispersed
Lcy6g0512 Lcy-Chr6:4789456 Lcy9g1066 Lcy-Chr9:34474792 1.22E-77 dispersed
Lcy6g0683 Lcy-Chr6:6636380 Lcy9g1066 Lcy-Chr9:34474792 2.00E-33 dispersed
Lcy6g0684 Lcy-Chr6:6645411 Lcy9g1066 Lcy-Chr9:34474792 5.80E-27 dispersed
Lcy7g0050 Lcy-Chr7:387716 Lcy9g1066 Lcy-Chr9:34474792 1.00E-72 dispersed
Lcy9g1066 Lcy-Chr9:34474792 Lcy9g1067 Lcy-Chr9:34502324 1.41E-167 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy9g1066 K00588 - csv:101212121 352.058