Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy9g1146 ATGCCGGAGAATGAGAGTCGCTGTGTTGTTACAGAGCCACGTTTAGTGGCTAGAAAGTTTCTGGCTAGGCCTCAGCATGAAGGGTTGGGCGCCATTGTTAGAAGGAGCATTGGAAGGTTTGAGCTGAAATACTTTGACCCTTTTCTGGTTTTGGATGAATTTTCAGTGACTGCCCCAGCTGGTTTCCCAGATCATCCACATAGAGGATTTGAGACAGTTACCTACATGTTACAGGGAAGTTTGACACATGAAGATTTTGAAGGCCACAAGGGAACAATAAGTGCAGGTGACTTGCAGTGGATGACTGCAGGTAAAGGAATTGTACATTCAGAAATGCCTGCAGCCCAAGGCACCCAAAAGGGCCTCCAACTATGGATCAACCTCTCTTCCAAGAATAAAATATCAGCTTCAACAACCTCCCTTTTGCTTGTGAATGAATCTTGTAAAATATTTGTTGTGCTGTGCTGTCTTATCAGTTCTCACCTTTTTGTTTCTTCCCCTCAGCTTTAG 510 44.31 MPENESRCVVTEPRLVARKFLARPQHEGLGAIVRRSIGRFELKYFDPFLVLDEFSVTAPAGFPDHPHRGFETVTYMLQGSLTHEDFEGHKGTISAGDLQWMTAGKGIVHSEMPAAQGTQKGLQLWINLSSKNKISASTTSLLLVNESCKIFVVLCCLISSHLFVSSPQL 169
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 35454811 35458543 - Maker00017667 Lcy9g1146 642262
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lcy9g1146 169 SUPERFAMILY RmlC-like cupins 14 134 IPR011051 -
Lcy9g1146 169 CDD cupin_pirin_N 33 128 - -
Lcy9g1146 169 Pfam Pirin 33 126 IPR003829 -
Lcy9g1146 169 Gene3D Jelly Rolls 27 137 IPR014710 -
Lcy9g1146 169 PANTHER PIRIN-RELATED 10 135 IPR012093 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy6g1672 Lcy-Chr6:31459536 Lcy9g1146 Lcy-Chr9:35454811 3.49E-79 dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy9g1146 K06911 - csv:101216351 256.144