Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy9g1151 CGAAAAGGGATTTGCAGTTGCAGTTGCAGAATATTTGAAATGGGATTGCTCGAGACTGTCAAAAACATCGGCAGCGACCACGCCCAGGTCGTCCCCTTGACGTTGTTCGTCGCCGTTCTCTGTTTTTGCTTGGTTATTGGCCACTTGCTCGAAGAAAATCGATGGGTTAATGAATCCATCACCGCCATTATCATTGTATACTCTCTTCTTCGTTTTCCCTCCCTCCTTTTCATTACATTTAGCTTCACTGTTGATCATATGGATTCATTCTCTCGTTTGGGGTCTTTGTTGGAGGAGGTGCTTCAGAATCCTTCCTTTAGGGAGACAAGCAAAGGAGGTGTTACTGGAACTATCATATTGGTCTGTAGCAAGGGGAAAAACTCTCATATCCTAACTTTTAATGAAGAAGTGTTCTTCATATATCTTCTTCCACCAATAATTTTCAATGCTGGGTTCGTACAGCCAGTGGCTGTTTCCAAGGGTGGGCTTTCATGGTCTGTCAGCACGGGACTATCTATAGGTGCTATTTTTTCATCCACGGACACAGTATGCACCCTGCAGGTACTACATCAAGAGGAAACACCTTTACTCTACAGCCTAGTCTTTGGGGAAGGAGTGGTGAATGATGCAACATCAGTTGTTCTCTTCAATGCAGTCCAGAAGATTGATATTACTAGGCTTAACAGCAAGACAGCGCTTCATCTTCTTGGAGATTTTTGTTACTTATTTTCAACCAGCACCACCCTTGGAGTGACTGAAAGGGAAGAAACTGCTAACTTCTTCCTTTTGGTTGCTGGAACCGGACTTCTAACAGCATTTATCCTGAAAACCTTATACTTCGGGAGACATTCTAGTGTGCGTGAGCTTGCCATAATGGTTTTAATGGCTTATCTGTCGTACATGCTAGCAGAGTTACTGGAGTTGAGTGGAATTCTCACAGTTTTCTTTTGTGGGATTATCATGTCGCACTATGCATGGCATAACGTCCTACTCCCACGCCTCAAAATAATTCTGACATATACACGTCACTTGATTGTTACTAAAATCTTTCTTTTACTCAAAAATCTTGGCAGCTTGTGGAAGTTTCTTGGTACATATAGCAGTACAGTGTTCTTGATTCTGCTTGGTCGTGCAGCCTTTGTATTTCCCCTATCTGGTATATCTAATTACTTTAATAAGCGGGAAGATAGATCGTCATCGTCTTATATGATCACATTTAAACAACAGATCATAATATGGTGGGCTGGGCTAATGAGAGGAGCTGTGTCCATTGCTCTGGCTTTCAAACAGTTCACCTATTCTGGGGTTACATTGGATCCAACCAACGCAACAATGATTACCATCACCACAGTAGTTGTACTCTTCACTACGGTGGTATTTGGGTTTCTAACAAAGCCACTCATAAGATGTCTGCTTCCTCCCAACCAAGCAACTAACAATACAAACAATTCCAGTCCGAAGTTCACCGAAGAGGACATAACTCTCCCTTTGCTCTCCATGGAAGAGTCTGCTGCAACCAATGTCCTCCGTGCAAAGGATAGTTTGTCGATGTTGATAGAGAGGCCTGTTTATACCATACATTTCTTTTGGAGGAAATTTGATGATACCTACATGAGGCCTATATTTGGAGGGCCTCGCAACAACCAACCTGGTGGTTCTCGTTGTTAA 1668 42.75 RKGICSCSCRIFEMGLLETVKNIGSDHAQVVPLTLFVAVLCFCLVIGHLLEENRWVNESITAIIIVYSLLRFPSLLFITFSFTVDHMDSFSRLGSLLEEVLQNPSFRETSKGGVTGTIILVCSKGKNSHILTFNEEVFFIYLLPPIIFNAGFVQPVAVSKGGLSWSVSTGLSIGAIFSSTDTVCTLQVLHQEETPLLYSLVFGEGVVNDATSVVLFNAVQKIDITRLNSKTALHLLGDFCYLFSTSTTLGVTEREETANFFLLVAGTGLLTAFILKTLYFGRHSSVRELAIMVLMAYLSYMLAELLELSGILTVFFCGIIMSHYAWHNVLLPRLKIILTYTRHLIVTKIFLLLKNLGSLWKFLGTYSSTVFLILLGRAAFVFPLSGISNYFNKREDRSSSSYMITFKQQIIIWWAGLMRGAVSIALAFKQFTYSGVTLDPTNATMITITTVVVLFTTVVFGFLTKPLIRCLLPPNQATNNTNNSSPKFTEEDITLPLLSMEESAATNVLRAKDSLSMLIERPVYTIHFFWRKFDDTYMRPIFGGPRNNQPGGSRC 555
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 35522556 35533480 + Maker00017728 Lcy9g1151 642267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy9g1151 555 PANTHER SODIUM/HYDROGEN EXCHANGER 31 153 IPR018422 GO:0005886(PANTHER)|GO:0006812(InterPro)|GO:0015385(PANTHER)|GO:0015385(InterPro)|GO:0015386(PANTHER)|GO:0016020(InterPro)|GO:0051453(PANTHER)|GO:0071805(PANTHER)|GO:0098719(PANTHER)|GO:1902600(InterPro)
Lcy9g1151 555 Gene3D - 168 218 - -
Lcy9g1151 555 Pfam Sodium/hydrogen exchanger family 156 469 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy3g1670 Lcy-Chr3:43977179 Lcy9g1151 Lcy-Chr9:35522556 4.47E-105 dispersed
Lcy3g1671 Lcy-Chr3:43987360 Lcy9g1151 Lcy-Chr9:35522556 1.24E-90 dispersed
Lcy9g1151 Lcy-Chr9:35522556 Lcy13g0204 Lcy-Chr13:2118084 6.73E-142 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy9g1151 - - - 0.0