Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy9g1190 ATGGTGGGGACACTTTCGATTCGGCTCGAGCGGCTTCTTCTAATTGGATCTGGGAATTTCGCGGATTTCTGCTCTTGGGTCATAGTTACTCATACTATGGAAGGTTCAATTCTTAGAAGGGTTATTCCATCAGACAACAGTTGTCTCTTCAATGCTGTTGGGTATGTTATGGACCATGATAAACACAAGGCTACTGAGCTAAGACAGGTCACAGCTGCAACAGTAGCTAGTGATCCAACAAGGTATTCTGAAGCATTTCTTGGAAAGCCAAATGAGGAGTATTGTGCTTGGATTCTTGATTCAGAGAAGTGGGGAGGCGCCATTGAGCTTTCGATATTGTCCGAATATTATGGGCGTGAAATTGCAGCATATGATATCCAGACCACACGATGCGATTTGTATGGTCAGGAAAAGAAGTATTCGGAAAGGGTTCTGCTGATATATGATGGACTCCACTATGATGCTTTAGTTATGTCTCCATCTGAGGGAGCTCCAGAGGAATTTGATCAGACCATATTTTCTGTGAATAGGGACAGGACAATTGGGCCCATTGAGGAGCAAGCTCTTCATTTTGTAAAAGAGCAGCAAAGGAAAAGGAGATTCACCGACACCGCCAACTTCACTCTGCGCTGTGGAGTTTGCCAAATTGGAGTCATTGGCCAAACGGTCATGTCAACTTTCAAGAGTATAGATAACATGAAGAGCGTTGGGCAAGCGGATCAGTTTGAGCTTTATCGACTCCGATTGTTGAATTGCTTTGGCAATCTGATTGTTGTATTACCATTTCAAAATCTTGATTACGCATGA 807 43.37 MVGTLSIRLERLLLIGSGNFADFCSWVIVTHTMEGSILRRVIPSDNSCLFNAVGYVMDHDKHKATELRQVTAATVASDPTRYSEAFLGKPNEEYCAWILDSEKWGGAIELSILSEYYGREIAAYDIQTTRCDLYGQEKKYSERVLLIYDGLHYDALVMSPSEGAPEEFDQTIFSVNRDRTIGPIEEQALHFVKEQQRKRRFTDTANFTLRCGVCQIGVIGQTVMSTFKSIDNMKSVGQADQFELYRLRLLNCFGNLIVVLPFQNLDYA 268
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 36307685 36312126 + Maker00017639 Lcy9g1190 642306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy9g1190 268 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 35 220 - GO:0004843(PANTHER)|GO:0005634(PANTHER)|GO:0005829(PANTHER)|GO:0016579(PANTHER)|GO:0030433(PANTHER)|GO:0030968(PANTHER)
Lcy9g1190 268 Pfam OTU-like cysteine protease 43 139 IPR003323 -
Lcy9g1190 268 Gene3D - 24 205 - -
Lcy9g1190 268 CDD OTU_plant_OTU1_2-like 35 198 - -
Lcy9g1190 268 SUPERFAMILY Cysteine proteinases 39 157 IPR038765 -
Lcy9g1190 268 ProSiteProfiles OTU domain profile. 37 159 IPR003323 -
Lcy9g1190 268 FunFam ubiquitin thioesterase OTU1 33 205 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy9g1190 K13719 - csv:101222942 373.244