Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy9g1219 ATGCACATATGCTGCAAGAAAGACCCCAAATTCAAGCCAAAGCCAAAACCAGTAAAGAAGACGAAGTTCTTACCGAGACAGAACGGCGATCTCTCGCTCACCTACGACGTCCTCCAAGCTTATGGAAACAACTACCTCGCACAAGTCACCATCGACAACAACAATCCGCTCGGCCGACTCGACCATTGGAACTTAACTTGGGAATGGATGAGAGGAGAATTCATTTCCACAATGCGAGGAGCTTACACTCACAAACTGGACTACTTTAGCTGCATCTATGGCCCTGCAGGCCAATACTATCAAGATCTCGACTTCTCGCAGATCATGAACTGCGAGAAGAACCCCGTCATCGCCGACCTCCCCGCCGACCGAGCCAACGATTCCAAAGTCGGCAAGTTACCGTTTTGCTGCAAGAACGGCACGATCCTACCGTCGTTGATGGATGAAAGCAAAGCAAGATCCATTTTTCAGCTACAAGTCTATAAGCTTCCCCCTGACTCCAACAGAACAGCCTTGTACCCTCCTCAGAAATGGAAGATCAATGGCATTCTTAACCCCAATTACAAATGTGGAGCTCCCATAAGAGTGCAACCAACACATTTTCCAGACCCAAATGGACTTCAAGCCACAAGCACAGCCATTGCAAGTTGGCAAGTGGTCTGCAACATCACAGCTCCAAAAGCCAAGCAATCAAGATGTTGTGTTTCATTCTCTGCTTATTACAATGACTCTGTTATTCCTTGCAACACTTGTGCTTGTGGGTGTGATGAAAATGAAACTTGCAACCCAAATTCTTCCCCAATGCTTCTTCCAGCAGAGGCCCTTTTAGTTCCATTTGCCAACAGAACTAGAAAGGCAAAAGCTTGGGCCAGAATCAAACACTTTCCAATCCCCAAAAGGCTCCCCTGTCCTGACAATTGTGGGGTTAGCATAAATTGGCATGTAAACTCAGATTATACCAGTGGTTGGACTGCTAGAATCACCCTTTTCAATTGGGAAGATTACCCTTTTGAGGATTGGTTTGCTGCTGTTCAACTGAACAGAGCTGCTAAAGGGTATGAAGATGTCTACTCCTTCAATGGGACAAAACTTCCACCAGATGTGATTAAGAATACCATCATGTTCCAAGGCTTGGAGGGTCTGAACTACCTCATGGGGGAGGTGAATGGGACGGACCCGAAATTCGATCCGAGAGTACCGGGAAAGCAGCAGTCGGTGATCTCTTTCTCTAAGAAGAATATGAGGAACCTCAACATAAAGGAAGGAGATGGATTTCCTACAAAAGTGTACTTCAATGGAGAAGAGTGTGCACTTCCTCCACATTTTCCTTTAGGAAATGGTGCTGCTCATAGCCTCCATCTCAGCAATGAACTTCTAGTGCTGCTGCTCACAGTTATGACCTTTTTCATTCTCTTCACAGATGGCTTTCATTGA 1434 46.03 MHICCKKDPKFKPKPKPVKKTKFLPRQNGDLSLTYDVLQAYGNNYLAQVTIDNNNPLGRLDHWNLTWEWMRGEFISTMRGAYTHKLDYFSCIYGPAGQYYQDLDFSQIMNCEKNPVIADLPADRANDSKVGKLPFCCKNGTILPSLMDESKARSIFQLQVYKLPPDSNRTALYPPQKWKINGILNPNYKCGAPIRVQPTHFPDPNGLQATSTAIASWQVVCNITAPKAKQSRCCVSFSAYYNDSVIPCNTCACGCDENETCNPNSSPMLLPAEALLVPFANRTRKAKAWARIKHFPIPKRLPCPDNCGVSINWHVNSDYTSGWTARITLFNWEDYPFEDWFAAVQLNRAAKGYEDVYSFNGTKLPPDVIKNTIMFQGLEGLNYLMGEVNGTDPKFDPRVPGKQQSVISFSKKNMRNLNIKEGDGFPTKVYFNGEECALPPHFPLGNGAAHSLHLSNELLVLLLTVMTFFILFTDGFH 477
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 36599933 36601366 - Maker00017665 Lcy9g1219 642335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy9g1219 477 PIRSF COBRA 23 474 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Lcy9g1219 477 Pfam COBRA-like protein 45 224 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Lcy9g1219 477 PANTHER COBRA-LIKE PROTEIN 7 1 469 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy11g1368 Lcy-Chr11:37407930 Lcy9g1219 Lcy-Chr9:36599933 2.52E-214 dispersed
Lcy9g1219 Lcy-Chr9:36599933 Lcy6g1379 Lcy-Chr6:20045346 1.45E-284 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy9g1219 - - - 0.0