Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy9g1288 ATGAAACTGCGAGGGGCGAGGGGTCCATCAAATGTGGACGATGATCTTTCAAGGCAAAACCAAACGCGGAGTCAGGCATGGGGATTGAGGACAGTGGCAACATCAAATTTATGGTTGCAGAAACGGGGAAGCAAGGAGCTGCTGGCCCTCAAACCCATCACATCCACATCGCATTCAGTTCCCCCTTATTTATTGGAATTCAATAATGTTGAATTTTCTTCTATTGGATCGGTTTCAGGTTCAAAGAAGCTGTTTCGTTTGTGGGATTTGTTGGAAATGGCTGAAAATGACCCCCAAGAGGGGCGATCTCTGGCTTTGACACCTACTTGGTCTGTTGCTTCCGTGTTGACAGTTTTCGTCGCAGTTTCGTTGCTTGTAGAGCGCTCCATTCATAGGCTAAGCTCTACTCTGATTGCATGCCAACTTAGCTTTACATTACTCTTGGATATTCAAGATGTTAAGTGGCTGGGAAAAACTCATAGAAAACCCTTATTTGAGGCAGTGGAGAAAATGAAAGAAGAGTTAATGCTGCTGGGATTCATTTCTTTGCTTCTGACAGCAACATCAAGTGTGATATCAAATATCTGCATTCCATCCAAGTTTTATGATACCTCTTTTACTCCATGCACCCAGTCGGAGATTGATGAACAAAATGAGGATAATTCTTCATCTGAGGCACGAAAGCTATATATGAGCTCTTTCTTCTTCCATCTCAATAGTCAATTGAAATCTGAAACTTTCCTCATTGTGCAGGGTCATGAGCCCTTTGTTTCATATGAAGGACTTGAGCAATTGCATCGCTTTATCTTCGTAATGGCATTAACTCATATATCTTATAGTTGCTTAACCATGTTGCTGGCAATTGTGAAGATCCACAGTTGGAGAGTATGGGAAATTGAAGCTCACCTGGACCGCCATGATTTATTCAATGAGACTACGAGAGAAGAGATAATGCAGAGACAATCTACCTTTGTACAATATCATACCGCCAATCCTTTAACCAGAAATAGTTTTCTTATCTGGATGACATGTTTCTTTCGGCAATTTGGGCGTTCTGTTGTTCGTTCTGACTACCTTACACTTCGCAAAGGCTTCATCACGAATCACAAACTCTCATCAAGATATGATTTCCATAGCTACATGGTCCGTTCAATGGAAGAAGAATTCCAAAGGATAGTCGGTGTGAGCGGTCCACTATGGGGATTTGTCGTTGCTTTTATGCTGTTTAATGTGAAAGGGTCTAACCTATACTTTTGGATAGCAGCTATTCCTGTTACTCTTGTTCTTTTAGTGGGCACAAAGTTGCAGCATGTTATTGCAACTTTAACGTTGGAGAATGCTGTAACTGGATTCTTTTCTGGAGCAAAGCTGAGGCCGCGTGATGATCTTTTCTGA 1395 41.86 MKLRGARGPSNVDDDLSRQNQTRSQAWGLRTVATSNLWLQKRGSKELLALKPITSTSHSVPPYLLEFNNVEFSSIGSVSGSKKLFRLWDLLEMAENDPQEGRSLALTPTWSVASVLTVFVAVSLLVERSIHRLSSTLIACQLSFTLLLDIQDVKWLGKTHRKPLFEAVEKMKEELMLLGFISLLLTATSSVISNICIPSKFYDTSFTPCTQSEIDEQNEDNSSSEARKLYMSSFFFHLNSQLKSETFLIVQGHEPFVSYEGLEQLHRFIFVMALTHISYSCLTMLLAIVKIHSWRVWEIEAHLDRHDLFNETTREEIMQRQSTFVQYHTANPLTRNSFLIWMTCFFRQFGRSVVRSDYLTLRKGFITNHKLSSRYDFHSYMVRSMEEEFQRIVGVSGPLWGFVVAFMLFNVKGSNLYFWIAAIPVTLVLLVGTKLQHVIATLTLENAVTGFFSGAKLRPRDDLF 464
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 37572574 37582424 + Maker00016948 Lcy9g1288 642404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy9g1288 464 PANTHER MLO-LIKE PROTEIN 1 93 464 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Lcy9g1288 464 MobiDBLite consensus disorder prediction 1 20 - -
Lcy9g1288 464 Pfam Mlo family 101 464 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy10g1948 Lcy-Chr10:43531013 Lcy9g1288 Lcy-Chr9:37572574 1.53E-161 dispersed
Lcy6g0576 Lcy-Chr6:5470583 Lcy9g1288 Lcy-Chr9:37572574 1.32E-89 dispersed
Lcy6g2311 Lcy-Chr6:47896064 Lcy9g1288 Lcy-Chr9:37572574 6.56E-40 dispersed
Lcy8g1891 Lcy-Chr8:45201927 Lcy9g1288 Lcy-Chr9:37572574 6.46E-35 dispersed
Lcy9g1288 Lcy-Chr9:37572574 Lcy3g0202 Lcy-Chr3:5838951 2.66E-08 dispersed
Lcy9g1288 Lcy-Chr9:37572574 Lcy6g2364 Lcy-Chr6:48434105 8.37E-57 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy9g1288 K08472 - csv:101207170 615.15