Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy9g1314 | ATGTCTGACGTGGCGAGTATAGCAGAGGCAGTGGCAGCAAGGTTTAGTTCTTTGGAGCTTATTGGAAGAGGTTCTTTTGGTGATGTCTACAAGGGGTTTGACAAGGAGCTTAACAAAGAAGTTGCTATCAAAGTTATTGATTTGGAAGAATCTGAGGATGAAATTGAGGATATTCAGAAGGAAATTTCTGTTTTGTCACAATGTCGATCGCCCTACATTACTGAGTACTATGGTTCTTATCTCCACCAGACGAAGTTATGGATAATAATGGAATATATGGCTGGTGGTTCTGTTGCAGATCTGCTGCAGTCTGGGCCACCGCTTGATGAAATGTCAATTGCATGCATTCTACGGGATTTGCTGCATGCAATTGATTATTTGCACACTGAAGGAAAAATTCACAGGGACATTAAAGCGGCAAACATTTTACTGAGTGAAAATGGTGATGTTAAGGTTGCAGATTTTGGTGTTTCTGCTCAATTAACAAGGACAATATCAAGGAGAAAGACATTTGTAGGAACTCCATTCTGGATGGCGCCAGAGGTAATTCAGAATTCTGAAGGATACAATGAGAAGGCAGACATCTGGTCTCTAGGAATCACTGCTATTGAAATGGCAAAAGGGGAGCCTCCACTTGCTGATCTTCATCCCATGAGAGTTCTTTTTATCATACCTCGAGAAAATCCACCTCAGTTGGATGAACATTTTTCTCGCCCTATGAAAGAATTAGTGTCACTGTGTCTGAAGAAAATACCTGCTGAGAGACCCAGTGCCAAAGAGCTTCTGAAGCATCGATTCATTAAGAATGCCAGGAAGAGTCCTAGGCTTCTGGAGAGAATAAGAGAACGTCCGAAGTACCAAATAAAGGATGATGAAGATGCAGAAACACCAACTAATGGTTCTAGAGCTATGGGTGAAACATCGGATACTGTGAAAGTATCAAGAAATGTAAGGGAGGAAACTGTTCGTGCCAGCAACCAGAGTAAAACTCCAAAGAATGCTGGATGGGACTTTAGCATTGGGGGGCCAAATAGTACAGGTACTGTTCGAAGTGTAGTAAAACCACCTCAAATTAGGGAAAGAAAACCAGAAATTCCTTATGGTCAGGCTGCACCTAGTAGAGTTGCAGAGAGTGGTAACTGGCCGACTGCATCTGGAAATGCACCTCGTGACATAGCAGAAAATGCTAGAAATTCGTACAATATGGGGGATGCTAGTGAAGATGAAGAGTTATCTGTAAGTGGTTCAGGAACCATTGTGATCCGGTCTCCCAGGGGGTCTCACGCATCTACTCAATTTCAAAATGAAAGCAGTCCGTCTGAAAGTGCACAAGCATATTTTGAGGACACATCTTTTAGTGGTACTGTTGTTATGCGTGGTCAACGTGATGATTCGGACTCTCCTCGGACTCCAAAATCCAGATTGGGAACTCAAGAAAGGACTTCAAGTTTGTCTCCTGAAGATAGTGCATTAAACCTTGCGGAGGCAAAGGCTGCAATGCAAGCAGCATTGAAGAAAACTAATGTAAGGGAAAGACCGGCCCTCAATAAACGCAATGACAGGAAGGAAAATAGAAGAACAGAGCAAACAGTGAGTAGCTCTGACTCTTCGAGGCATTCTCGTGAATTCTTTGATGCACCAAGAGCATTGCCAAAACCGTCTCCATCAATTGATGATGAAGAAAGTGCAAAAATAGCATTGTCTTCTGCACCTTTATCGATTTTGTTTATGTCAACCTTGAAAGAGGTAGTTGCGGATGATTCGGAAGGATCACCTGCTCGTTCTGTAATTAATGCACTTATAAATATGGAACACCGAAAACCTGGATCATGTGAGGTTCTTGTTACCAAGTTGCTTCAGAAATTGGCCAGTTCCAATGAATCTTCACTGAAAGATTTACAAGACTTGGCAACTCGCATATTCTCCAAGGCAAAGACAGTTCCCGAAGATACTCAAAATGTCGCAGATTCTGATAGCAGCAAAAGGCAACCAAACAGGGAACTTCATTCAAATTCTAATTTGAGCTCGCTTGCTAGATTTTTACTCTCCAGATGGCAAGGTCAGGTGTCACGGGATCTCAGTCCAGCTTAA | 2091 | 42.47 | MSDVASIAEAVAARFSSLELIGRGSFGDVYKGFDKELNKEVAIKVIDLEESEDEIEDIQKEISVLSQCRSPYITEYYGSYLHQTKLWIIMEYMAGGSVADLLQSGPPLDEMSIACILRDLLHAIDYLHTEGKIHRDIKAANILLSENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNSEGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRENPPQLDEHFSRPMKELVSLCLKKIPAERPSAKELLKHRFIKNARKSPRLLERIRERPKYQIKDDEDAETPTNGSRAMGETSDTVKVSRNVREETVRASNQSKTPKNAGWDFSIGGPNSTGTVRSVVKPPQIRERKPEIPYGQAAPSRVAESGNWPTASGNAPRDIAENARNSYNMGDASEDEELSVSGSGTIVIRSPRGSHASTQFQNESSPSESAQAYFEDTSFSGTVVMRGQRDDSDSPRTPKSRLGTQERTSSLSPEDSALNLAEAKAAMQAALKKTNVRERPALNKRNDRKENRRTEQTVSSSDSSRHSREFFDAPRALPKPSPSIDDEESAKIALSSAPLSILFMSTLKEVVADDSEGSPARSVINALINMEHRKPGSCEVLVTKLLQKLASSNESSLKDLQDLATRIFSKAKTVPEDTQNVADSDSSKRQPNRELHSNSNLSSLARFLLSRWQGQVSRDLSPA | 696 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 37904579 | 37921416 | + | Maker00016682 | Lcy9g1314 | 642430 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy9g1314 | 696 | MobiDBLite | consensus disorder prediction | 458 | 487 | - | - | |
Lcy9g1314 | 696 | Coils | Coil | 41 | 68 | - | - | |
Lcy9g1314 | 696 | FunFam | serine/threonine-protein kinase dst1 isoform X1 | 12 | 301 | - | - | |
Lcy9g1314 | 696 | MobiDBLite | consensus disorder prediction | 648 | 671 | - | - | |
Lcy9g1314 | 696 | MobiDBLite | consensus disorder prediction | 320 | 352 | - | - | |
Lcy9g1314 | 696 | CDD | STKc_MST3_like | 14 | 287 | - | - | |
Lcy9g1314 | 696 | MobiDBLite | consensus disorder prediction | 510 | 529 | - | - | |
Lcy9g1314 | 696 | MobiDBLite | consensus disorder prediction | 419 | 444 | - | - | |
Lcy9g1314 | 696 | MobiDBLite | consensus disorder prediction | 278 | 391 | - | - | |
Lcy9g1314 | 696 | ProSiteProfiles | Protein kinase domain profile. | 15 | 267 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lcy9g1314 | 696 | MobiDBLite | consensus disorder prediction | 504 | 561 | - | - | |
Lcy9g1314 | 696 | Gene3D | Transferase(Phosphotransferase) domain 1 | 12 | 303 | - | - | |
Lcy9g1314 | 696 | SMART | serkin_6 | 15 | 267 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lcy9g1314 | 696 | ProSitePatterns | Protein kinases ATP-binding region signature. | 21 | 44 | IPR017441 | GO:0005524(InterPro) | |
Lcy9g1314 | 696 | SUPERFAMILY | Protein kinase-like (PK-like) | 13 | 317 | IPR011009 | - | |
Lcy9g1314 | 696 | PANTHER | STERILE20-LIKE KINASE, ISOFORM B-RELATED | 13 | 664 | IPR050629 | GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER) | |
Lcy9g1314 | 696 | MobiDBLite | consensus disorder prediction | 471 | 487 | - | - | |
Lcy9g1314 | 696 | Pfam | Protein kinase domain | 16 | 267 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lcy9g1314 | 696 | MobiDBLite | consensus disorder prediction | 278 | 297 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy13g0347 | Lcy-Chr13:3901720 | Lcy9g1314 | Lcy-Chr9:37904579 | 1.55E-20 | dispersed | |
Lcy4g2246 | Lcy-Chr4:49025183 | Lcy9g1314 | Lcy-Chr9:37904579 | 5.61E-37 | dispersed | |
Lcy5g2364 | Lcy-Chr5:46474646 | Lcy9g1314 | Lcy-Chr9:37904579 | 8.82E-40 | dispersed | |
Lcy6g0152 | Lcy-Chr6:1424354 | Lcy9g1314 | Lcy-Chr9:37904579 | 6.06E-30 | dispersed | |
Lcy6g2295 | Lcy-Chr6:47648500 | Lcy9g1314 | Lcy-Chr9:37904579 | 5.17E-44 | dispersed | |
Lcy7g0345 | Lcy-Chr7:2886853 | Lcy9g1314 | Lcy-Chr9:37904579 | 5.28E-72 | dispersed | |
Lcy8g1430 | Lcy-Chr8:40953190 | Lcy9g1314 | Lcy-Chr9:37904579 | 1.71E-34 | dispersed | |
Lcy9g1314 | Lcy-Chr9:37904579 | Lcy8g1697 | Lcy-Chr8:43542269 | 7.09E-30 | dispersed | |
Lcy9g1314 | Lcy-Chr9:37904579 | Lcy12g0039 | Lcy-Chr12:651534 | 2.35E-48 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66187 | None | None | None | None | Lcy | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy9g1314 | K08838 | - | csv:101214412 | 1234.55 |