Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy9g1381 | ATGTTGTTGGCTCGATTTCTCACCGTCGTTTTTCTGATATCTCTCTGCTTCATAAGCCTCGCTTCCGGCGCCACTCGGCTGCCGGACGACGAAGTTGAGGCGTTGAGGGAGATCGGAAAGACATTGGGGAAGACGGACTGGAATTTCACGGCCGATCCATGCGGCGGTTTGAGTAGCGGTTGGATATCGAGTTCTGCACAGTTCGACCCGAGTTTTTCTAATAACGTCACCTGCAACTGCACGTTTCAGAACAATACAGTCTGTCACGTCACTAACATTCTTCTAAAGGCGCAGAGCCTTCAAGGTACTCTGCCACCGCAAATAGTGAGGTTGCCTTTCCTGCAGGAACTTTCTCTTCTTGGAAATCGATTGACGGGCCCAATCCCAAAAGAGATTGGAAACATCAGCACTCTTGTAGAGTTGGTCCTAGAAATGAATCATTTATCTGGAAGTGTACCTCCGGAACTTGGAAATTTGACCAGCTTATCAAGATTGCTTCTAACCTCAAACAACTTTTCTGGGGAGCTCCCACCTTCACTGGCAAGGATAGCCTCATTGACGGACTTTCGAATTAGTGATAATCATTTCACAGGGCCAATCCCTACATTTATTCAGAATTGGACGAATCTTGGAAAAGTGGCTATTCAGGCAAGCGGGTTGAGTGGGCCAATTCCTTCTGAAATTGGACTTTTGACAACATTAACTGATGTGAGAATCAGTGACTTAACTGGAAGTTCATCACCCTTTCCACCCCTTAATACTTTGACAAAATTGAAAGTCCTGATATTGAGGAATTGCAATATAACAGGGGAGTTGCCCAAAAATCTTGATGCGTTGACAGCATTGAAAACCTTAGACTTTAGCTTCAACAAAATTACTGGACAAATACCTGCCAGCTTTGAAGCTTTGAAAAAAGTGGATAGCATATATTTAGCTGGAAACATGATAAATGGATCAGTGCCCACTTGGATGCTACAGCAAGGAGAAAGCATTGATCTCTCTTATAACAAATTTACTCAGAGAAATGGTCAGAACAATGGTTGTCAAACACGAAATTTAAACCTGTTTGCAAGCTCTTCACAGGACAATAATAATTCCAGTGGAACAGTTTCATGTTTAGCAAACACTTGCGGAAAAACTTCATACTCTCTCCATATCAACTGCGGTGGAAAGGAAGAATTAATTAATGGAACAACCAAATTTGATGGAGACACAAACACTGGAAAATCATCATTGTTTTTTCAAGGTGGAGCAAATTGGGGATTTAGCAACACTGGTAGTTTTATGGACGATGATCGCACAACAGATGACTTTATTTCATTAAATTCATCTGTTCTCTCAATACCGAATCCTGAATTGTACATGAGGGCACGCATTTCTCCAATCTCTCTTACTTATTATGCATATTGCATGGGTACTGGAAACTACACAGTAAGCCTCCATTTTGCTGAGATAGCATTTACTAATGACAAATCATACAGAAGCCTTGGCAGACGCTTATTTGATGTCTATATTCAGGGAAAGCTGGAGTTGAAAGATTTTAATATTGCAGATGCAGCAGGTGGTGCTGGCAAACCTTTTGTAAAGAAATTTACTGTTCCTGTGACTGATGGTACTATAGAGATCCGCCTATTTTGGGCTGGGAAGGGGACAAATGCAATCCCTGTGAGAGGAGTTTATGGTCCTTTAATTTCTGCCATTTCTGTTGATCCTGCAGACTTTGTGCCACCATCGGAAGGTGGAAATGCCATATCTGCCGGCACTGTGGTTGGAATTGTGGCTGCTGTGGTCTTTGTTATCATCTTGGTTCTTGGAGTCTTGTGGTGGAGAGGTTGCTTTAGAAAGAAAAGCACACTAGAACAAGAGTTGAAGGGTCTAGATCTCGGAACAGGTTCATTTTCATTAAGACAAATCAGAGCTGCCACTAACAATTTTGATGCTGCCAATAAGATTGGAGAAGGCGGTTTTGGTCCAGTTTACAAGGGTGTTCTTGCAGATGGCACTGTAATTGCAGTGAAGCAACTTTCTTCAAAATCAAAGCAAGGAAATCGTGAATTTGTAAATGAGATAGGCATGATATCTGCATTGCAACACCCTCATCTAGTGAAGCTTTATGGATGTTGTATTGAAGGAAATCAACTTTTACTAATTTATGAGTATTTGGAAAATAATAGCCTTGCTCGTGCCTTATTCGGACCCGAAGAATATCAAATGAAATTGGATTGGCCAACTAGGCACAAGATTTGTGTTGGTATAGCCAGAGGTTTAGCATACCTTCACGAGGAGTCGAGACTTAAGATTGTTCATCGAGACATCAAAGCTACCAATGTTCTGCTCGATAAAAATTTAAACCCCAAGATTTCTGACTTTGGTTTGGCCAAGCTGGATGAAGAAGAAAATACACACATAAGCACCCGGGTTGCTGGAACCTTTGGGTATATGGCACCAGAATACGCCATGCGAGGCTACTTAACTGACAAAGCAGATGTTTATAGCTTTGGGATCGTGGCACTGGAAATAGTTAGTGGTCGAAGCAACACAAGTTTCCGAACCAAGGATGATTGCTTTTACCTTCTTGACCATGCTAATACTTTAAAAGAGAAAGATAGTTTAATAGAGCTTGTCGATCCACGGTTAGGCTCTGAATTCAACAAAAGAGAGGCGATGGCAATGATCAATATTGCTCTGCAATGCACGAACGTCATTGCTTCGGACAGACCTGCCATGTCGTCAGTGGTGAGCATGCTGGAAGGGAAGGTTGCTGTGAAAGAGGTGGTTTCAGATCCTAGTGTCTCAAAACAGGATGTGAATGCAATGTGGAGCCAAATTTATCGCCAGAAAGGGCAAACAGGCGAGAGCCAGACGCAAAGTATGTCGATGGATGGACCATGGACTGGTTCTTCAACTACTGCCAGTGATCTCTATCCCATCAACATGGATTCTAAATACTTGGAAAATAGGAACTAG | 2967 | 42.3 | MLLARFLTVVFLISLCFISLASGATRLPDDEVEALREIGKTLGKTDWNFTADPCGGLSSGWISSSAQFDPSFSNNVTCNCTFQNNTVCHVTNILLKAQSLQGTLPPQIVRLPFLQELSLLGNRLTGPIPKEIGNISTLVELVLEMNHLSGSVPPELGNLTSLSRLLLTSNNFSGELPPSLARIASLTDFRISDNHFTGPIPTFIQNWTNLGKVAIQASGLSGPIPSEIGLLTTLTDVRISDLTGSSSPFPPLNTLTKLKVLILRNCNITGELPKNLDALTALKTLDFSFNKITGQIPASFEALKKVDSIYLAGNMINGSVPTWMLQQGESIDLSYNKFTQRNGQNNGCQTRNLNLFASSSQDNNNSSGTVSCLANTCGKTSYSLHINCGGKEELINGTTKFDGDTNTGKSSLFFQGGANWGFSNTGSFMDDDRTTDDFISLNSSVLSIPNPELYMRARISPISLTYYAYCMGTGNYTVSLHFAEIAFTNDKSYRSLGRRLFDVYIQGKLELKDFNIADAAGGAGKPFVKKFTVPVTDGTIEIRLFWAGKGTNAIPVRGVYGPLISAISVDPADFVPPSEGGNAISAGTVVGIVAAVVFVIILVLGVLWWRGCFRKKSTLEQELKGLDLGTGSFSLRQIRAATNNFDAANKIGEGGFGPVYKGVLADGTVIAVKQLSSKSKQGNREFVNEIGMISALQHPHLVKLYGCCIEGNQLLLIYEYLENNSLARALFGPEEYQMKLDWPTRHKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKNLNPKISDFGLAKLDEEENTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNTSFRTKDDCFYLLDHANTLKEKDSLIELVDPRLGSEFNKREAMAMINIALQCTNVIASDRPAMSSVVSMLEGKVAVKEVVSDPSVSKQDVNAMWSQIYRQKGQTGESQTQSMSMDGPWTGSSTTASDLYPINMDSKYLENRN | 988 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 38736514 | 38747026 | + | Maker00016934 | Lcy9g1381 | 642497 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy9g1381 | 988 | FunFam | probable LRR receptor-like serine/threonine-protein kinase At1g53430 | 614 | 720 | - | - | |
Lcy9g1381 | 988 | Gene3D | Ribonuclease Inhibitor | 203 | 374 | IPR032675 | - | |
Lcy9g1381 | 988 | Pfam | Protein tyrosine and serine/threonine kinase | 648 | 916 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Lcy9g1381 | 988 | CDD | STKc_IRAK | 651 | 918 | - | - | |
Lcy9g1381 | 988 | FunFam | Putative LRR receptor-like serine/threonine-protein kinase | 721 | 928 | - | - | |
Lcy9g1381 | 988 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 250 | 341 | - | - | |
Lcy9g1381 | 988 | Gene3D | Phosphorylase Kinase; domain 1 | 612 | 720 | - | - | |
Lcy9g1381 | 988 | Gene3D | - | 379 | 571 | - | - | |
Lcy9g1381 | 988 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED | 10 | 932 | IPR051824 | - | |
Lcy9g1381 | 988 | SUPERFAMILY | L domain-like | 86 | 339 | - | - | |
Lcy9g1381 | 988 | ProSiteProfiles | Protein kinase domain profile. | 645 | 931 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lcy9g1381 | 988 | Pfam | Leucine Rich Repeat | 114 | 134 | IPR001611 | GO:0005515(InterPro) | |
Lcy9g1381 | 988 | Pfam | Leucine Rich Repeat | 161 | 181 | IPR001611 | GO:0005515(InterPro) | |
Lcy9g1381 | 988 | Pfam | Leucine Rich Repeat | 138 | 159 | IPR001611 | GO:0005515(InterPro) | |
Lcy9g1381 | 988 | Pfam | Malectin domain | 383 | 567 | IPR021720 | - | |
Lcy9g1381 | 988 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 767 | 779 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Lcy9g1381 | 988 | SUPERFAMILY | Galactose-binding domain-like | 409 | 552 | IPR008979 | - | |
Lcy9g1381 | 988 | Gene3D | Ribonuclease Inhibitor | 31 | 202 | IPR032675 | - | |
Lcy9g1381 | 988 | FunFam | Nuclear pore complex protein NUP107 | 36 | 202 | - | - | |
Lcy9g1381 | 988 | Pfam | Leucine rich repeat | 257 | 316 | IPR001611 | GO:0005515(InterPro) | |
Lcy9g1381 | 988 | FunFam | Putative leucine-rich repeat receptor-like serine/threonine-protein kinase | 381 | 572 | - | - | |
Lcy9g1381 | 988 | SUPERFAMILY | Protein kinase-like (PK-like) | 629 | 936 | IPR011009 | - | |
Lcy9g1381 | 988 | Gene3D | Transferase(Phosphotransferase) domain 1 | 721 | 937 | - | - | |
Lcy9g1381 | 988 | SMART | serkin_6 | 645 | 916 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lcy9g1381 | 988 | MobiDBLite | consensus disorder prediction | 947 | 973 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy4g0747 | Lcy-Chr4:8988227 | Lcy9g1381 | Lcy-Chr9:38736514 | 2.04E-14 | dispersed | |
Lcy9g1381 | Lcy-Chr9:38736514 | Lcy9g1385 | Lcy-Chr9:38801635 | 0 | dispersed | |
Lcy9g1386 | Lcy-Chr9:38818230 | Lcy9g1381 | Lcy-Chr9:38736514 | 2.85E-17 | dispersed | |
Lcy9g1380 | Lcy-Chr9:38709991 | Lcy9g1381 | Lcy-Chr9:38736514 | 1.54E-244 | tandem | |
Lcy5g1982 | Lcy-Chr5:42755047 | Lcy9g1381 | Lcy-Chr9:38736514 | 8.32E-77 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66195 | None | None | None | None | Lcy | PK |
Pathway information
