Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lcy9g1418 | ATGGGGAGTGTTATATGGATGGTTGTGGTGTGTTTAGTCATGGTATTGGGATGGAGAGTTTTGAATTGGATTTGGGTGAGGCCAAAGAAATTAGAGAAGCTTCTAAGACAGCAAGGATTCACTGGAAATTCTTATAGAATTCTCTATGGAGATTCAAAGGAGAGAGCCAAGATGAGGGACCAGGCAATCTCAAAGCCAATGAAGAACTTCTCCAATGATATCGCTCCACGTGTCATTCCTTCCATTTATCAAACCATTCAGAATTATGGTAAGGATTCATTTATGTGGTTGGGCCCCGTTCCAAGAGTGCACATCATGGACCCACAACATCTCAAAACTGTGTTTTCAAAAATGAATGAAATCCAAAGGACAGTTAGAAACCCCCTTGTCGGGTTTATTGCAGATGGACTTAATAACGATCAAGGAACAAAATGGGCTAAGCACAGAAAGATAATTAACCCTGCATTCCATTTACAAAAGTTGAAGGATATGGTACCAGCATTCTTTCATAGTTGTAATGATATGGTCAGCAAATGGGAAAGCATGGTTTCTGAAAATGGATTTTGTGAATTGGATGTGATGCCTCATCTAAGAACGATGGCTGCTGACGTCATTTCTCGAACAGCATTTGGAAGTAGCTATGAGAAAGGAAAAAGGATCTTCCAACTTCAAAATCAACTAGTTGATCTGGTGTTTAAGACTACCTTAGAGGTTTATATTCCAGGATGGAGTTTTCTACCCACAAAGTCAAACAATAAAATAAAAGAGATTGATAAAGAGATAAAAGCTTTGGTCTTGGGTATGATAAATGAAAGGCAAAAATCTAGGGAGGTAGGTGAAGCTATACACAATGATCTTTTAGGCATTCTCATGGAATCCAATTTCAATGAAATTCGAGAACATGGAGACAGTAAACATGCTGGAATGAGCATAAAAGATGTAATTGAAGATTGCAAGCTTTTTTATCTTGCTGGGCAAGAAACTACTGGTACGTTACTAATTTGGACCATGATTTTGTTGAGTTCATATCCAAAATGGCAAGAGCGAGCAAGAGCAGAGGTCCTAGAGATCTTTGGTAACGAAAGACCACATTTCGATGGTTTAAATCGTCTAAAAGTTGTAACTATGATTATAAACGAGGTTCTGAGGTTTTACCCACCGGCAAATTTGATTCATCGTCTTGTGAAAAAGGAAACAAAGCTTGAGAATTTGACATTACCTGCTGGAGTGCTGGTGGCCATACCAATTATTCTCATCCATCGTGAGCGTGAGCTATGGGGTGAAGATGCAAATGAATTCAAACCAGAAAGATTTTCGGAGGGAGTTTCTAAGGCAACAAATAATAATCCACTTGCTTTCTTACCGTTTGGTTGGGGTCCTCAAATATGCATCGGACAAAACTTCACCATGATTGAGGCTAAAATAGCAATATCAATGATTCTACAACGCTTTTCATTTGAGCTTTCTTCATCCTACACTCACGCTCCTTCCGCTGATTTCACAATGCAACCTCAACATGGAGCTCATATCATCCTACACAAACTCTAG | 1548 | 39.08 | MGSVIWMVVVCLVMVLGWRVLNWIWVRPKKLEKLLRQQGFTGNSYRILYGDSKERAKMRDQAISKPMKNFSNDIAPRVIPSIYQTIQNYGKDSFMWLGPVPRVHIMDPQHLKTVFSKMNEIQRTVRNPLVGFIADGLNNDQGTKWAKHRKIINPAFHLQKLKDMVPAFFHSCNDMVSKWESMVSENGFCELDVMPHLRTMAADVISRTAFGSSYEKGKRIFQLQNQLVDLVFKTTLEVYIPGWSFLPTKSNNKIKEIDKEIKALVLGMINERQKSREVGEAIHNDLLGILMESNFNEIREHGDSKHAGMSIKDVIEDCKLFYLAGQETTGTLLIWTMILLSSYPKWQERARAEVLEIFGNERPHFDGLNRLKVVTMIINEVLRFYPPANLIHRLVKKETKLENLTLPAGVLVAIPIILIHRERELWGEDANEFKPERFSEGVSKATNNNPLAFLPFGWGPQICIGQNFTMIEAKIAISMILQRFSFELSSSYTHAPSADFTMQPQHGAHIILHKL | 515 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 39151275 | 39157360 | - | Maker00016813 | Lcy9g1418 | 642534 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lcy9g1418 | 515 | SUPERFAMILY | Cytochrome P450 | 77 | 513 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy9g1418 | 515 | Gene3D | Cytochrome P450 | 67 | 514 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy9g1418 | 515 | FunFam | Cytochrome P450 734A1 | 25 | 515 | - | - | |
| Lcy9g1418 | 515 | PRINTS | P450 superfamily signature | 454 | 463 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy9g1418 | 515 | PRINTS | P450 superfamily signature | 324 | 341 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy9g1418 | 515 | PRINTS | P450 superfamily signature | 463 | 474 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy9g1418 | 515 | PRINTS | P450 superfamily signature | 376 | 387 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy9g1418 | 515 | PRINTS | E-class P450 group I signature | 333 | 359 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy9g1418 | 515 | PRINTS | E-class P450 group I signature | 463 | 486 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy9g1418 | 515 | PRINTS | E-class P450 group I signature | 313 | 330 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy9g1418 | 515 | PRINTS | E-class P450 group I signature | 86 | 105 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy9g1418 | 515 | PRINTS | E-class P450 group I signature | 200 | 218 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy9g1418 | 515 | PRINTS | E-class P450 group I signature | 453 | 463 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy9g1418 | 515 | Pfam | Cytochrome P450 | 87 | 492 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy9g1418 | 515 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 10 | 507 | IPR050665 | GO:0004497(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lcy9g1418 | Lcy-Chr9:39151275 | Lcy9g1421 | Lcy-Chr9:39208785 | 7.68E-290 | dispersed | |
| Lcy9g1418 | Lcy-Chr9:39151275 | Lcy9g1420 | Lcy-Chr9:39191794 | 1.05E-276 | proximal |
Pathway information