Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy9g1421 ATGGCCGACGCGGTTACTATTTCAATTTGGACGGTCGTGGTTTGTTTGGTTGTATTGGGATGGAAAGTTCTGAACTGGATTTGGCTGAGGCCCAAGAAATTAGAGAAGCTTCTGAGACAGCATGGATTCGCCGGAAATTCTTACCGGATTCTCTACGGCGACTTGAAGGACAGAGCCGCCATGAGGGAGCGGGCCATCTCCAAGCCGATGAACTTCTCCAATGATATTGCTCCACGTGTTATTCCTTCTGTTCTTCACACCATCCAGATTTATGGTAAAAATTCATTTATGTGGCTTGGCCCCATACCAAGAGTGCACATCATGGACCCTGAACAACTTAAAACTGTGTTTACATTAATCAATGATTTCCAAAAGCCAGTCATGAATCCCCTTGTCAAGTTGCTTGCAGATGGACTTGTAAACCATGAAGGAGCAAAATGGGCCAAACATAGAAAGATAATCAATCCTGCATTTCATTTAGAAAAGCTCAAGGACATGGTACCAGCATTCTATCATAGTGCTAACGAGATGGTTAGCAAATGGGAAACCATGGTTTCTGAAGAGGGATCATGTGAGTTGGATGTAATGCCTTTTCTACAAAATATGGCTGCTGATGTCATTTCTCGAACAGCATTTGGAAGTAGCTACGAAAAAGGAAAAAAGATCTTCAAGCTTCAAACTGAACTAGCTGATTTGGTGATTCAATCTACCATGGGAATTTATATTCCAGGATGGAAATTTCTACCCACAAAGTCGAACAATAAAATGAAAGAGATGAGTAATGAGATAAAAAAATTGATATTGGGTATCATAAATGAACGACAGAAGTCTATGAAGGCAGGTGAAGTTGCACAAGGCGATCTATTAGGCATTCTCATGGAATCCAATTTCAAAGAAATTCAAGAACATGGAAACAATAAAGACATTGGAATGAGCATAGAAGATGTTATTGATGAATGCAAGATTTTCTACATTGCTGGCCAAGAAACTACTGCTACATTACTAATTTGGACGATGGTTTTGTTGAGTTCATACTCAGAATGGCAAGAGCGAGCGAGAAAAGAGGTCTTCGAGGTCTTTGGCAACAAAAAACCAGATTATGATGGTTTAAGTCACTTAAAAGTGGTAACTATGATTCTCAATGAGGTTCTCAGGTTATACCCACCAGTGAGCATGCTTGGTCGTGTTGTTAAAAAAGAAACACGACTTGGAAAATTGACGTTACCAGCAGGAGTGATGATAGGCTTACCAATGATTCTTATCCAACGTGATCATGAGCTATGGGGTGAAGATGCAGATGAATTCAAACCAGAAAGATTTTCTGAGGGAGTTTCTAAAGCAACCAAAAATCCAACCGCTTTCGTCCCATTTGGTTGGGGTCCTCGTATATGCATAGGACTAAACTTTGCTATGATTGAAGCAAAAATGGCATTATCAATAATCCTACAACGCTTCTCATTTGAGCTTTCTTCATCGTATACTCACGCTCCTACCGCAGCTTTAACAACCCAACCTCAACATGGAGCTCATATTGTCCTACACAAACTCTAG 1551 40.43 MADAVTISIWTVVVCLVVLGWKVLNWIWLRPKKLEKLLRQHGFAGNSYRILYGDLKDRAAMRERAISKPMNFSNDIAPRVIPSVLHTIQIYGKNSFMWLGPIPRVHIMDPEQLKTVFTLINDFQKPVMNPLVKLLADGLVNHEGAKWAKHRKIINPAFHLEKLKDMVPAFYHSANEMVSKWETMVSEEGSCELDVMPFLQNMAADVISRTAFGSSYEKGKKIFKLQTELADLVIQSTMGIYIPGWKFLPTKSNNKMKEMSNEIKKLILGIINERQKSMKAGEVAQGDLLGILMESNFKEIQEHGNNKDIGMSIEDVIDECKIFYIAGQETTATLLIWTMVLLSSYSEWQERARKEVFEVFGNKKPDYDGLSHLKVVTMILNEVLRLYPPVSMLGRVVKKETRLGKLTLPAGVMIGLPMILIQRDHELWGEDADEFKPERFSEGVSKATKNPTAFVPFGWGPRICIGLNFAMIEAKMALSIILQRFSFELSSSYTHAPTAALTTQPQHGAHIVLHKL 516
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 39208785 39212678 - Maker00016803 Lcy9g1421 642537
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lcy9g1421 516 CDD CYP72 81 512 - -
Lcy9g1421 516 Gene3D Cytochrome P450 77 515 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g1421 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Lcy9g1421 516 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g1421 516 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g1421 516 PRINTS E-class P450 group I signature 202 220 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g1421 516 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g1421 516 PRINTS E-class P450 group I signature 88 107 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g1421 516 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g1421 516 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g1421 516 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g1421 516 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g1421 516 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g1421 516 PRINTS P450 superfamily signature 464 475 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g1421 516 PANTHER CYTOCHROME P450 FAMILY MEMBER 13 508 IPR050665 GO:0004497(PANTHER)
Lcy9g1421 516 FunFam Cytochrome P450 734A1 28 516 - -
Lcy9g1421 516 Pfam Cytochrome P450 90 491 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g1421 516 SUPERFAMILY Cytochrome P450 81 514 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy2g1679 Lcy-Chr2:25043966 Lcy9g1421 Lcy-Chr9:39208785 1.32E-274 dispersed
Lcy2g1758 Lcy-Chr2:28016628 Lcy9g1421 Lcy-Chr9:39208785 1.52E-261 dispersed
Lcy9g0284 Lcy-Chr9:7371433 Lcy9g1421 Lcy-Chr9:39208785 0 dispersed
Lcy9g1418 Lcy-Chr9:39151275 Lcy9g1421 Lcy-Chr9:39208785 7.68E-290 dispersed
Lcy9g1421 Lcy-Chr9:39208785 Lcy9g2180 Lcy-Chr9:46464919 5.26E-126 dispersed
Lcy9g1421 Lcy-Chr9:39208785 Lcy9g1423 Lcy-Chr9:39233141 7.21E-247 proximal
Lcy9g1420 Lcy-Chr9:39191794 Lcy9g1421 Lcy-Chr9:39208785 0 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy9g1421 - - - 0.0