Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy9g1440 ATGCCGACGCAGGATTTGTGGCGTCGGGAGTTCCGTTCAATTAAAGTCCTAATTTCAAAAATAGATTTCATTCTCATCTCTCTCCCCTTCGTGAGCCTCCCCACGCATTCACTCACGCCCATCCGTTTCGCGCTGCCGTCTTCGACTTCGCTTGTCGCCGCCGTCTTCAACTCCCGGTTCCGCCTCCGTCATCTTCGACTCCCGGTTCCGCCGTCGCCGTCTTCGACTCTCGGTTCTGTCGCCGCCGTCTTTGACACCCAGTTCTGCCGCCGTCGTGGTCGTGGGGGTGGTTGTTGTCTCGCCACCGGTGCTCCCATAGAGGGGAGATTTGTGCTTCGTGGGTTGTGCTTGATTTCAGCCGCCGCCGAGGAGATTTGTTGCTGTTTTCCGCTATTTTCTCGATTTATTGTTGATTCTGCATTTGAGACTCATGTTAAGTCGACCGAACAATTAAAGATGAAGGATAGTTATTTTTCTCTCAAACTATCTGAGCCATACAAAGGAATTACTGACTGCTTTGCCCGAACAATTAAAGATGAAGGAGTCATTTCCCTGTGGAGGGGGAACACTGCAAATGTTATCAGATACTTCCCCACACAAGCTTTGAATTTTGCCTTCAAGGATTACTTCAAGAGGCTGTTCAACTTCAAGAAAGACAAAGATGGTTACTGGAAATGGTTTGCTGGGAATTTGGCTTCTGGTGGTGTTGCTGGTGCTTCATCTCTTTTGTTTGTTTATTCCCTTGATTATGCTAGAACTCGTCTGGCCAATGATGCTAAGGCTGCTAAAAGGGTGATGAGAGGCAATTTAACGGCCTTGTTGATTTTTACAAGAAAACCCTTAAATCTGATGACATTGCTGGGCTGTATCGTGGATTTAACATCTCTTGTGTTGGAATTATTGTGTATCGTGGTCTTTACTTTGGAATGTATGATTCAATGA 942 46.71 MPTQDLWRREFRSIKVLISKIDFILISLPFVSLPTHSLTPIRFALPSSTSLVAAVFNSRFRLRHLRLPVPPSPSSTLGSVAAVFDTQFCRRRGRGGGCCLATGAPIEGRFVLRGLCLISAAAEEICCCFPLFSRFIVDSAFETHVKSTEQLKMKDSYFSLKLSEPYKGITDCFARTIKDEGVISLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLASGGVAGASSLLFVYSLDYARTRLANDAKAAKRVMRGNLTALLIFTRKPLNLMTLLGCIVDLTSLVLELLCIVVFTLECMIQ 313
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 39387676 39391385 - Maker00016603 Lcy9g1440 642556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy9g1440 313 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 154 268 IPR002113 GO:0005471(InterPro)|GO:0005471(PANTHER)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Lcy9g1440 313 PRINTS Adenine nucleotide translocator signature 199 211 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Lcy9g1440 313 PRINTS Adenine nucleotide translocator signature 166 187 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Lcy9g1440 313 PRINTS Adenine nucleotide translocator signature 225 238 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Lcy9g1440 313 SUPERFAMILY Mitochondrial carrier 160 271 IPR023395 -
Lcy9g1440 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 108 213 IPR018108 -
Lcy9g1440 313 Pfam Mitochondrial carrier protein 165 217 IPR018108 -
Lcy9g1440 313 Gene3D Mitochondrial carrier domain 132 289 IPR023395 -
Lcy9g1440 313 PRINTS Mitochondrial carrier protein signature 240 258 IPR002067 GO:0055085(InterPro)
Lcy9g1440 313 PRINTS Mitochondrial carrier protein signature 188 208 IPR002067 GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy5g2467 Lcy-Chr5:47412620 Lcy9g1440 Lcy-Chr9:39387676 1.00E-42 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy9g1440 K05863 - vvi:100262663 212.231