Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy9g1538 ATGCAGTTATATCATCATCCATACTCTTTGAACAGCCAGAAGGTGAGACTTGCCTTGGAAGAGCAAGGCATTGATTACACGTCGTATCATGTCAATCCTATCACGGCCAAGAACATGGACTCCTCATTCTTCAAGATGAACCCAAGTGCAAAACTTCCCGTCTTTCAAAATGGTTCCCACGTCATTTTCGACACCATCGAGATAATTCAGTATATAGAGAGAATTGCAGTTGTCTCCTCAGGGACCGATGACGTAATGCCGAGTAGCAGAGAAGTTGTTGAATGGATGCAGAAGATACAAGAGTGGAATCCAAAATTTTTCACTCTTGCCCACATCCCCGAGAAGTATCGCCTTACTGTTACCAAGTTTATAAGGCGGGTGGTGATCGCTCGGATGGCTGAAACTCCCGAAATGGCTGCTGCCTACCATCGTAAGCTCAGAGAAGCATACGAGACTGAAGACAAATTGAAAAGCAAAACTGTTGTCAAACAAAGCACTGAACATCTAGTCAGACTTCTTGATGAAATCGAATCGAAACTAGGCGAAACTTCTTACTTGGCAGGGGAAGAGTTTACCATGGCTGATGCCGTGTTCATTCCGGTGCTGGCTCGACTCGTGCTGTTGAAGCTGGAGGACGAGTATATAGGTAGCAGACCGAACATTGCAGAGTATTGGATCTTGGTGCAGCAGAGGCCAAGCTACAAGAAGGTGATTGGGAAGTATTTCAAGGGATGGAGAAAGCACAAAACACTTCTGAAAACTTGGTGCTTTGTTCATATCAGAACCTTACTGAGGAGATATTGA 804 44.78 MQLYHHPYSLNSQKVRLALEEQGIDYTSYHVNPITAKNMDSSFFKMNPSAKLPVFQNGSHVIFDTIEIIQYIERIAVVSSGTDDVMPSSREVVEWMQKIQEWNPKFFTLAHIPEKYRLTVTKFIRRVVIARMAETPEMAAAYHRKLREAYETEDKLKSKTVVKQSTEHLVRLLDEIESKLGETSYLAGEEFTMADAVFIPVLARLVLLKLEDEYIGSRPNIAEYWILVQQRPSYKKVIGKYFKGWRKHKTLLKTWCFVHIRTLLRRY 267
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 40480269 40484706 + Maker00016192 Lcy9g1538 642654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy9g1538 267 PANTHER GLUTATHIONE S-TRANSFERASE TCHQD 1 267 IPR044617 GO:0004364(InterPro)
Lcy9g1538 267 SUPERFAMILY Thioredoxin-like 1 74 IPR036249 -
Lcy9g1538 267 SUPERFAMILY GST C-terminal domain-like 137 242 IPR036282 -
Lcy9g1538 267 CDD GST_N_family 1 73 - -
Lcy9g1538 267 Pfam Glutathione S-transferase, N-terminal domain 3 75 IPR004045 -
Lcy9g1538 267 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 80 IPR004045 -
Lcy9g1538 267 Gene3D Glutaredoxin 1 75 - -
Lcy9g1538 267 SFLD Glutathione Transferase (cytosolic) 1 231 IPR040079 -
Lcy9g1538 267 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 118 251 IPR010987 -
Lcy9g1538 267 Pfam Glutathione S-transferase, C-terminal domain 163 224 - -
Lcy9g1538 267 CDD GST_C_family 129 225 - -
Lcy9g1538 267 Gene3D - 113 238 - -
Lcy9g1538 267 SFLD Main (cytGST) 1 231 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy9g1538 Lcy-Chr9:40480269 Lcy13g1039 Lcy-Chr13:22711472 1.04E-14 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy9g1538 K22077 - csv:101222476 506.908