Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy9g1538 | ATGCAGTTATATCATCATCCATACTCTTTGAACAGCCAGAAGGTGAGACTTGCCTTGGAAGAGCAAGGCATTGATTACACGTCGTATCATGTCAATCCTATCACGGCCAAGAACATGGACTCCTCATTCTTCAAGATGAACCCAAGTGCAAAACTTCCCGTCTTTCAAAATGGTTCCCACGTCATTTTCGACACCATCGAGATAATTCAGTATATAGAGAGAATTGCAGTTGTCTCCTCAGGGACCGATGACGTAATGCCGAGTAGCAGAGAAGTTGTTGAATGGATGCAGAAGATACAAGAGTGGAATCCAAAATTTTTCACTCTTGCCCACATCCCCGAGAAGTATCGCCTTACTGTTACCAAGTTTATAAGGCGGGTGGTGATCGCTCGGATGGCTGAAACTCCCGAAATGGCTGCTGCCTACCATCGTAAGCTCAGAGAAGCATACGAGACTGAAGACAAATTGAAAAGCAAAACTGTTGTCAAACAAAGCACTGAACATCTAGTCAGACTTCTTGATGAAATCGAATCGAAACTAGGCGAAACTTCTTACTTGGCAGGGGAAGAGTTTACCATGGCTGATGCCGTGTTCATTCCGGTGCTGGCTCGACTCGTGCTGTTGAAGCTGGAGGACGAGTATATAGGTAGCAGACCGAACATTGCAGAGTATTGGATCTTGGTGCAGCAGAGGCCAAGCTACAAGAAGGTGATTGGGAAGTATTTCAAGGGATGGAGAAAGCACAAAACACTTCTGAAAACTTGGTGCTTTGTTCATATCAGAACCTTACTGAGGAGATATTGA | 804 | 44.78 | MQLYHHPYSLNSQKVRLALEEQGIDYTSYHVNPITAKNMDSSFFKMNPSAKLPVFQNGSHVIFDTIEIIQYIERIAVVSSGTDDVMPSSREVVEWMQKIQEWNPKFFTLAHIPEKYRLTVTKFIRRVVIARMAETPEMAAAYHRKLREAYETEDKLKSKTVVKQSTEHLVRLLDEIESKLGETSYLAGEEFTMADAVFIPVLARLVLLKLEDEYIGSRPNIAEYWILVQQRPSYKKVIGKYFKGWRKHKTLLKTWCFVHIRTLLRRY | 267 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 40480269 | 40484706 | + | Maker00016192 | Lcy9g1538 | 642654 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy9g1538 | 267 | PANTHER | GLUTATHIONE S-TRANSFERASE TCHQD | 1 | 267 | IPR044617 | GO:0004364(InterPro) | |
Lcy9g1538 | 267 | SUPERFAMILY | Thioredoxin-like | 1 | 74 | IPR036249 | - | |
Lcy9g1538 | 267 | SUPERFAMILY | GST C-terminal domain-like | 137 | 242 | IPR036282 | - | |
Lcy9g1538 | 267 | CDD | GST_N_family | 1 | 73 | - | - | |
Lcy9g1538 | 267 | Pfam | Glutathione S-transferase, N-terminal domain | 3 | 75 | IPR004045 | - | |
Lcy9g1538 | 267 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 1 | 80 | IPR004045 | - | |
Lcy9g1538 | 267 | Gene3D | Glutaredoxin | 1 | 75 | - | - | |
Lcy9g1538 | 267 | SFLD | Glutathione Transferase (cytosolic) | 1 | 231 | IPR040079 | - | |
Lcy9g1538 | 267 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 118 | 251 | IPR010987 | - | |
Lcy9g1538 | 267 | Pfam | Glutathione S-transferase, C-terminal domain | 163 | 224 | - | - | |
Lcy9g1538 | 267 | CDD | GST_C_family | 129 | 225 | - | - | |
Lcy9g1538 | 267 | Gene3D | - | 113 | 238 | - | - | |
Lcy9g1538 | 267 | SFLD | Main (cytGST) | 1 | 231 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy9g1538 | Lcy-Chr9:40480269 | Lcy13g1039 | Lcy-Chr13:22711472 | 1.04E-14 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy9g1538 | K22077 | - | csv:101222476 | 506.908 |