Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy9g1650 ATGTCGTCTCTACATTTTCTCTACCTTCTCTCTCTTTTCACCTTGCTCACTGGAATCAAGTCTGCTGACGAGCGTCAAATTCTGACCAAACTCAAATCCAGTCTCCAAAATTCAAACACCAATGTTTTTGACGACTGGGGACTTGAAAATCCCATCTGCAACTTCACTGGAATCACCTGTAATTCAGACAATTCCGTCAGGGAAATTGACCTCTCCAGAAGGGCTTTATCTGGGGTTGTTCCTTTTGATTCCATTTGTCAGTTGAAGTCATTGGAGAAGCTGGCTTTTGGGTTCAATTCCTTGCATGGTGAAGCAACCCAGGATTTGAACAATTGTGTCAAATTGAAGTATTTGGATCTTGGTAGCAATTCCTTCTCCGGATCCTTCCCTGACATACATTCTTTGAGTGAGTTGCAGTATCTGTATTTGAATTTGAGTGGGTTTTCGGGGAAGTTTCCATGGAAATCAGTTGGGAATTTGACTGGTTTGATTCAGCTGAGCCTTGGGGATAACCCTTTTGACAACACTACGTTTCCAGTGGAGGTCACCAATTTGAAGAAACTCAATTGGCTTTACTTGTCAAACTGCAGCTTAACAGGGGAAATTCCAAGGTCTATAGGTAATCTCACAGAGCTTCTTAATTTGGAATTTTCAGACAATTATGTCACAGGGACTATTCCGGCGGAGATTGGGAACCTGCACAATCTATGGCAGTTGGAGTTTTACAACAATCAATTAACGGGGACACTTCCAGTGGGGTTAAGAAACCTAACCAGGCTAAAGAATTTCGACGCTTCGATAAATTATATTCATGGGGATCTATCGGAGTTGAGGTTTTTGACGAACCTGGTTACTCTGCAAATCTTTGACAACCAAATCTCCGGCCAAGTTCCGGTGGAGTTTGGTGAGTTCAAGTCGCTTGTGAATCTCTCCCTTTACAAGAACATGCTTACAGGTCCTCTTCCGCAATCGATTGGTTCTTGGACCAACTTTTATTACATCGATGCATCTGAAAATTTCTTGACGGGCTCGATTCCTCCTGATATGTGCAAGATGGGGACGATGTGGAAGCTTCTCATTCTTCAGAACAATTTCACCGGCGAAATTCCGGCGACCTACGCTAATTGCCCCACTTTAACCCGATTTAGAGTCAGTCAGAACTCGCTCAGCGGCGTCGTACCGGCCGGAATTTGGGGATTACCGAACGTGAATATAATTGATCTCGCGTGGAATCAATTGGAAGGTTCGATCACTTCCGATATTGGAAAGGCTGTGGCTCTCTCGGAATTATACATCGGAAATAATCGATTTTCTGGTCGATTGCCATTGGAGATTTCGCAAGCGAAATCTCTCGCTTCGGTTGATCTGAGCAATAATCAATTCTCCGATGAAATTCCGACGACTATCGGTGACCTGAAGAATCTCGATAGCTTCGAATTACAGAGCAATAAATTCTCCGGTTCGATTCCAGAGACGATCGGCTCGTGTAATTCCCTAAGTATTGTGAATCTCGCGGAGAATTTCTTCTCTGGAAAAATTCCTTCGTCTCTAGGGTTTCTTCCTGTTCTAAACTCTTTGAATCTCTCCAATAACGACCTCTCTGGTGAAATCCCCTCGACATTTTCGCATCTGAAATTAAGTCTTCTCGATCTTTCCAACAATCAATTAACCGGTCCAGTACCTCAATCGCTCTCGAACGGAGCTTACAAAGAAAGCTTCGCCGGAAACCCTGGCCTCTGTAGTGAGACCGATGGCTTTCTACGGCGATGTTCACAGAGTTCCGGCGCGCCCAAAGACGTCCGAATTCTCGTCATCTGTTTCGCCGTCGGATTGCTTCTTCTCGGCGTGACGCTATGGTGCTTCATAACCTTGAAAAAGAGCGAAAAAGATCGAGATCGATCACTTAAAGAGGAATCGTGGGACCTGAAATCCTTCCACGTAATGACGTTCACAGAGGACGAGATCCTCGATTCCATTAAAGACGAGAATCTAATCGGAAAGGGAGGTTCTGGCAACGTTTACAAAGTAACCGTCGGAAACGGGAAAGAGCTCGCCGTGAAGCATATTTGGAACACCGATCCGTACGACGGCAAGAAGAATAATCGGAGCTCATCGCCGATTCTCCGGAAACAAAGAACGAAGTCGTCGGAATTCGACTCGGAAGTGAAGACTCTGAGCTCGATCCGCCATGTGAACGTGGTGAAGCTCTACTGCAGCATTACGAGCGAGGTTTCGAACCTGTTGGTTTACGAATATATGCCGAATGGAAGCTTATGGGACAGACTTCACACGTCGAGAAAAATGGAGTTGGATTGGGAAACAAGATACGAAATCGCAGTCGGAGCGGCGAAGGGATTGGAGTATCTTCATCACGGCTGTGATCGGCCGGTGATCCACCGGGATGTTAAGTCCAGTAACATACTCTTGGATGAATTTCTCAAGCCCAGAATTGCCGATTTTGGGCTTGCCAAAATTCTTCACAGAAATGGGTTCAACGACACCACCCATGTAATTGCAGGCACCCCGGGCTACATCGCTCCAGAGTATGGATACACTTATAAAGTCGACGAGAAGAGTGATGTGTATAGTTTTGGAGTTGTGTTGATGGAGTTGGTCAGTGGGAAAAAGGCAATAGAGGCGGAGTTTGGAGAGAATAAGGATATTGTGCAATGGGTGGCAAACAATTTGAAGACTAGAGAGAGTGTGTTAAGCTTGGTAGATTCGAGAATCCCAGATGCATTTAAAGAAGATGCTATTAAGGTATTGAGAATTGCTATCTTGTGCACAGCCAAACTTCCGACGTTGAGACCCACAATGAGAAGTGTGGTTCAAATGCTTGAAGAAGCCCAACCGTGTCGGCTAGTTGGAATTGTGATAAGCAAAGATAGTGGGAGTGTTAAAAAGGAACTATCCGTAGATATCAACAAGATTAGTCTCTAA 2940 44.93 MSSLHFLYLLSLFTLLTGIKSADERQILTKLKSSLQNSNTNVFDDWGLENPICNFTGITCNSDNSVREIDLSRRALSGVVPFDSICQLKSLEKLAFGFNSLHGEATQDLNNCVKLKYLDLGSNSFSGSFPDIHSLSELQYLYLNLSGFSGKFPWKSVGNLTGLIQLSLGDNPFDNTTFPVEVTNLKKLNWLYLSNCSLTGEIPRSIGNLTELLNLEFSDNYVTGTIPAEIGNLHNLWQLEFYNNQLTGTLPVGLRNLTRLKNFDASINYIHGDLSELRFLTNLVTLQIFDNQISGQVPVEFGEFKSLVNLSLYKNMLTGPLPQSIGSWTNFYYIDASENFLTGSIPPDMCKMGTMWKLLILQNNFTGEIPATYANCPTLTRFRVSQNSLSGVVPAGIWGLPNVNIIDLAWNQLEGSITSDIGKAVALSELYIGNNRFSGRLPLEISQAKSLASVDLSNNQFSDEIPTTIGDLKNLDSFELQSNKFSGSIPETIGSCNSLSIVNLAENFFSGKIPSSLGFLPVLNSLNLSNNDLSGEIPSTFSHLKLSLLDLSNNQLTGPVPQSLSNGAYKESFAGNPGLCSETDGFLRRCSQSSGAPKDVRILVICFAVGLLLLGVTLWCFITLKKSEKDRDRSLKEESWDLKSFHVMTFTEDEILDSIKDENLIGKGGSGNVYKVTVGNGKELAVKHIWNTDPYDGKKNNRSSSPILRKQRTKSSEFDSEVKTLSSIRHVNVVKLYCSITSEVSNLLVYEYMPNGSLWDRLHTSRKMELDWETRYEIAVGAAKGLEYLHHGCDRPVIHRDVKSSNILLDEFLKPRIADFGLAKILHRNGFNDTTHVIAGTPGYIAPEYGYTYKVDEKSDVYSFGVVLMELVSGKKAIEAEFGENKDIVQWVANNLKTRESVLSLVDSRIPDAFKEDAIKVLRIAILCTAKLPTLRPTMRSVVQMLEEAQPCRLVGIVISKDSGSVKKELSVDINKISL 979
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 41654795 41658857 - Maker00016802 Lcy9g1650 642766
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lcy9g1650 979 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 753 961 - -
Lcy9g1650 979 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 276 948 IPR051716 -
Lcy9g1650 979 ProSitePatterns Serine/Threonine protein kinases active-site signature. 797 809 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lcy9g1650 979 Pfam Leucine Rich Repeat 546 566 IPR001611 GO:0005515(InterPro)
Lcy9g1650 979 Pfam Leucine Rich Repeat 523 544 IPR001611 GO:0005515(InterPro)
Lcy9g1650 979 Pfam Leucine Rich Repeat 114 131 IPR001611 GO:0005515(InterPro)
Lcy9g1650 979 Pfam Leucine Rich Repeat 187 209 IPR001611 GO:0005515(InterPro)
Lcy9g1650 979 Pfam Leucine Rich Repeat 450 472 IPR001611 GO:0005515(InterPro)
Lcy9g1650 979 ProSitePatterns Protein kinases ATP-binding region signature. 665 687 IPR017441 GO:0005524(InterPro)
Lcy9g1650 979 SUPERFAMILY L domain-like 362 582 - -
Lcy9g1650 979 FunFam Receptor-like protein kinase HAIKU2 642 752 - -
Lcy9g1650 979 Gene3D Ribonuclease Inhibitor 21 177 IPR032675 -
Lcy9g1650 979 FunFam Leucine-rich receptor-like protein kinase family protein 180 276 - -
Lcy9g1650 979 SUPERFAMILY Protein kinase-like (PK-like) 649 947 IPR011009 -
Lcy9g1650 979 SMART serkin_6 659 946 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy9g1650 979 SUPERFAMILY L domain-like 35 413 - -
Lcy9g1650 979 FunFam Probable inactive receptor kinase RLK902 21 179 - -
Lcy9g1650 979 Pfam Protein kinase domain 661 944 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy9g1650 979 FunFam Leucine-rich repeat receptor-like protein kinase TDR 277 592 - -
Lcy9g1650 979 Gene3D Transferase(Phosphotransferase) domain 1 753 955 - -
Lcy9g1650 979 Gene3D Ribonuclease Inhibitor 305 593 IPR032675 -
Lcy9g1650 979 Gene3D Ribonuclease Inhibitor 178 299 IPR032675 -
Lcy9g1650 979 Gene3D Phosphorylase Kinase; domain 1 642 752 - -
Lcy9g1650 979 Pfam Leucine rich repeat N-terminal domain 22 61 IPR013210 -
Lcy9g1650 979 ProSiteProfiles Protein kinase domain profile. 659 953 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy4g0134 Lcy-Chr4:1752421 Lcy9g1650 Lcy-Chr9:41654795 1.61E-200 dispersed
Lcy5g1855 Lcy-Chr5:41365553 Lcy9g1650 Lcy-Chr9:41654795 3.89E-97 dispersed
Lcy6g1083 Lcy-Chr6:12087105 Lcy9g1650 Lcy-Chr9:41654795 3.99E-80 dispersed
Lcy9g1650 Lcy-Chr9:41654795 Lcy9g2275 Lcy-Chr9:47182689 4.24E-82 dispersed
Lcy9g1649 Lcy-Chr9:41629593 Lcy9g1650 Lcy-Chr9:41654795 1.06E-106 tandem
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66211 None None None None Lcy PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy9g1650 - - - 0.0