Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy9g1783 | ATGCCGGGGCTAACCTGTAATGCCTGTAACAAAGAATTTCTAGACGCCGATGAGCAAAAGCTTCACTACAAATCCGAATGGCATCGATACAATCTTAAGCGCAAGTTTTCGAATTCTAGTGCCCTTAGATGCTCTCGTCTGCTCGAACAGTTTTCAAGTAATAACACCGACTCTTGCATGGACAGTGGCATTGGTGATAGTTGGGGTTGTGGTGTGCATGTTCTGGAAGCACGTATGGAATATGACATGCTTCCGGTAGCTAATGTTCCTGGGGTTACAGAGGCATTATTTTTAGCTAGACAGTCTGCTGCTGCTGCACAAGAGAATGCCAAATCAAAAGAGTCCTCAATGTCATACTCTTGTAGTCTTTGTAGCAAAGCTTACAGGAGCGCTCAGGCTCATGCCCAACATCTTAAATCTAGGAGTCACATCATCCGCGCTTCGCAAGGAACACATGATCAAGAAGTTGAAAAGCCAATAATTAAGCCCCTTCCTCAGCGAATTTCGAATAAGGTACCTCAACAAAATGAGGAGGAAGAGAGTGAGGAGGAGTGGGAAGAAGTTGATCCTGACGAAGAAATGATCGACGAGGATGAGGGTGAGGATGACGATTCTGATGCCATTGAGGTGGACTTGGATCCATCATGCTGCTTCATGTGTGATCTAGAGCATGATACCATTGATAGCTGCATGGTCCACATGCATAAGCAACATGGGTTCTTTATCCCTGATGTCGAATATTTGAAGGATCCGAAAGGCTTCCTTACATACCTAGGCCTGAAGGTGACGAGGGATTTCAGGTGTCTGTACTGCAACGATAATTGTCTTCCATTTGGCAGCTTGGAAGCAGTTAGGAAGCACATGGAAGCGAAAAGCCATTGCAAAGTGCATTATGGTGATGGAGACGAGAATGAAGAAGTAGAATTGGAAGAATTTTATGATTACAGTAGCAGTTATGTGGATGGAAGTGGCAACCAGCTAGTAGCATCAGGGGATGGGGACAATTCTGTTGAACTTGGTAGTGGTGGAGCTGAGCTCATCTTAGTTCAAAGAACTAGCGAACGGCAAACGACCAAAACACTTGGTTCCAGGCAATTTCTACGTTATTATCGTCAAAAACCACGACCATCTCCTGCAAATGATTCAGCCATAACTGCTGCATTGGCAGCAAGGTACAGGAGCATGGGATTGGCGACTGTACAATCAAGAGAAAGGATGATCAAGATGAAAGTGATGAAAGAAATCAATCGAACCGGGTTGGAGGCCATGCGTACCAAAATCGGATTGAAGAACAACGTAATTCGAAACCTGCCTAAGAATGTTCCATTCTAG | 1332 | 44.74 | MPGLTCNACNKEFLDADEQKLHYKSEWHRYNLKRKFSNSSALRCSRLLEQFSSNNTDSCMDSGIGDSWGCGVHVLEARMEYDMLPVANVPGVTEALFLARQSAAAAQENAKSKESSMSYSCSLCSKAYRSAQAHAQHLKSRSHIIRASQGTHDQEVEKPIIKPLPQRISNKVPQQNEEEESEEEWEEVDPDEEMIDEDEGEDDDSDAIEVDLDPSCCFMCDLEHDTIDSCMVHMHKQHGFFIPDVEYLKDPKGFLTYLGLKVTRDFRCLYCNDNCLPFGSLEAVRKHMEAKSHCKVHYGDGDENEEVELEEFYDYSSSYVDGSGNQLVASGDGDNSVELGSGGAELILVQRTSERQTTKTLGSRQFLRYYRQKPRPSPANDSAITAALAARYRSMGLATVQSRERMIKMKVMKEINRTGLEAMRTKIGLKNNVIRNLPKNVPF | 443 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 42992733 | 42996503 | + | Maker00016236 | Lcy9g1783 | 642899 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy9g1783 | 443 | PANTHER | ZINC FINGER PROTEIN 622 | 1 | 41 | IPR040025 | GO:0030687(PANTHER)|GO:0042273(PANTHER) | |
Lcy9g1783 | 443 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 119 | 143 | IPR013087 | - | |
Lcy9g1783 | 443 | MobiDBLite | consensus disorder prediction | 177 | 206 | - | - | |
Lcy9g1783 | 443 | SUPERFAMILY | beta-beta-alpha zinc fingers | 3 | 36 | IPR036236 | - | |
Lcy9g1783 | 443 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 121 | 143 | IPR013087 | - | |
Lcy9g1783 | 443 | MobiDBLite | consensus disorder prediction | 164 | 206 | - | - | |
Lcy9g1783 | 443 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 6 | 28 | IPR013087 | - | |
Lcy9g1783 | 443 | SMART | ZnF_U1_5 | 116 | 150 | IPR003604 | GO:0003676(InterPro)|GO:0008270(InterPro) | |
Lcy9g1783 | 443 | SMART | ZnF_U1_5 | 1 | 35 | IPR003604 | GO:0003676(InterPro)|GO:0008270(InterPro) | |
Lcy9g1783 | 443 | SMART | c2h2final6 | 4 | 28 | IPR013087 | - | |
Lcy9g1783 | 443 | SMART | c2h2final6 | 266 | 293 | IPR013087 | - | |
Lcy9g1783 | 443 | SMART | c2h2final6 | 215 | 238 | IPR013087 | - | |
Lcy9g1783 | 443 | SMART | c2h2final6 | 119 | 143 | IPR013087 | - | |
Lcy9g1783 | 443 | SUPERFAMILY | beta-beta-alpha zinc fingers | 114 | 149 | IPR036236 | - | |
Lcy9g1783 | 443 | Pfam | C2H2 type zinc-finger (2 copies) | 217 | 319 | IPR041661 | - | |
Lcy9g1783 | 443 | SUPERFAMILY | beta-beta-alpha zinc fingers | 201 | 275 | IPR036236 | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy9g1783 | K14816 | - | csv:101219700 | 624.394 |