Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy9g1903 ATGCAGGCAGATCAGACGGGGATAAGTTTGAGACCAGGTGGCGGCGGTGGCCTTCGTGGAAGCAGATTTGTTACCCCTCGCTTCGATTCCTCCTCCGCCGATTCTTCGTCGCTTCGTCCTCATGGCGGCGTTTCGCAAATCCTCAAGGGCACTCAAGTACGTGTACCTGATGTAAATATGGACATAGAATATTATACTGGAGATCTACGGTTTGAAGGTCGTGAACGAATCCAGTACACTCGAGACCAGCTTCTGCAGCTCAGGGAGGTTGCAACAGTCCCTGAGGATATCTTGAAGGTCAAACTAGATGTTGAGACTGAGATTGTTGGAGAGGATCAAACATGGGCTCGTGCTGAAAGCAATCAGCAATCACAATCTCAAGGCCGTTACTTTGAGCCAGACAATCGAGATTGGCGTGGTCGATCTGGACAGTTACCTGCGTCCACGGAGGAAGGATTTTGGGAGGCAAGTCGCGAGAACAAGGATTTATCAGGACAATCTGAGTCGAGGTTCCAAGATTCAAATAATAGGAGCCAAGTTTCTGGTAACCAAGGGGTCGGTACTGCAACTGCCCTTATCAAGGCTGAAGTTCCTTGGTCAGTTAGAAGAGGTAATATCTCAGAAAAGGAACGTGTTTTGAAGACAGTAAAAGGTATACTTAATAAATTGACTCCAGAAAAGTTTGACGTACTCAAAGGTCAATTGATTGACTCTGGAATTACATCCGCTGATATTTTGAAGGATGTTATATCTCTTATATTTGAGAAGGCCGTGTTTGAGCCCACATTTTGCCCTATGTATGCACTGTTGTGCTCTGACCTTAACGAGAAGCTTCCTTCATTTTCATCTGATGAGCCTGGAGGGAAAGATATCACTTTTAAACGAGTTCTCTTAAATATTTGCCAAGAAGCATTTGAAGGTGCTGATAATCTGAGGGCAGAAATCAGGCAGATGACTAATCCTGAGCATGACTTGGAAAGAAGAGACAAAGAAAGAATGGTCAAGCTTCGAACTCTAGGTAACATTCGCCTGATAGGTGAGCTTCTAAAACAGAAGATGGTGCCTGAAAAGATCGTTCACCATATTGTTCTGGAGCTGTTGGGGCCTGACACTAAAGCATGCCCTGCTGAGGAGAATGTTGAGGCTATTAGTCAGTTTTTTAACACAATTGGTAAGCAGCTGGATGAGAGCCCAAAATCACGACGGGTCAATGATTTATATTTCAGCCGGTTGAAGGACCTCACTACAAACTCCCAACTAGCTCCTAGGTTGAGATTTATGGTCCGTGATGTTCTTGATTTACGGGCCAACAACTGGGTTCCCAGGCGTGAAGAGGTGAAAGCAAAAACCATCACTGAAATTCATACAGAGGCTGAGAAGAATCTAGGGCTTCGTCCGGGTTCAATTGCAATGATGAGAAATGGCCGTAATGCCGAGGCACTTGGGGGGTTAAGTCCTGGTGGTTTTCCTGTTGCTCGACCTGGTTTTGGGGGTATGATGCCCGGAATGCCTGGAACCAGGAAAATGCCTGGTATGCCTGGACTGGATTCAGACAATTGGGAGGTTCCTAGATCCCGATCAATGCCAAGGGGCGAAAGCGGAGGTCATACTCAGGCTTCCGCACGTGTCCAGTCACCATTAATCAGCAAAACACCTTCGATTAATTCAAAATATCTACCTCAGGGGAGTGGTGGTGTAATAACTGGTAAAACAAGTGCCTTGCTACAGGGTAGTGCTGCATCTCCTGCCCGACCAAGTTCCATCCAAGGAACTCAGCCTGTTGCTCACAACCCTAGACCGGTTGCTCCAGTTGCACCAGCCGTATCCTCCCCTCCGAAGCCAACAGCTCCTGCTGCAGTATCCCATTCTGCTGATCTTCACAAGAAAACCGTTTCGCTGCTTGAGGAATACTTCAGTGTACGGATTCTCGACGAAGCTCTACAGTGTGTAGAGGAGCTGAAATCTCCAGCTTATCACCCTGAGGTTGTTAAAGAATCTCTTATCATAGCACTCGAAAAGATTCCTCCATGTGTAGACCCAGTTGTTAAGCTTCTTGAGCACTTGCTTCACAAGAATGTCTTGACTGCAAAGGATGTAGGTACCGGATGCCTTCTATACGGATCAATGATGGATGATATTGGCATCGATCTACCAAAAGCACCAAACAATTTTGGTGAGATTCTCGGGAAGTTGATTTTGATCGGGGGTCTCGATTTCACGGTTGTGAAGGAGATTCTTAAGAAGCTGGAAGATGACTACTTCCAGAAATCCATTTTTGGTGGTGCTATGAAGAGCCTCAACTCTAGCCCTTCTGGAGAAGGAATTCTGGCAACTCAAAGTGTTGAGATCCAGGCATGTGAGAATTTACTTGCGTGA 2376 46.3 MQADQTGISLRPGGGGGLRGSRFVTPRFDSSSADSSSLRPHGGVSQILKGTQVRVPDVNMDIEYYTGDLRFEGRERIQYTRDQLLQLREVATVPEDILKVKLDVETEIVGEDQTWARAESNQQSQSQGRYFEPDNRDWRGRSGQLPASTEEGFWEASRENKDLSGQSESRFQDSNNRSQVSGNQGVGTATALIKAEVPWSVRRGNISEKERVLKTVKGILNKLTPEKFDVLKGQLIDSGITSADILKDVISLIFEKAVFEPTFCPMYALLCSDLNEKLPSFSSDEPGGKDITFKRVLLNICQEAFEGADNLRAEIRQMTNPEHDLERRDKERMVKLRTLGNIRLIGELLKQKMVPEKIVHHIVLELLGPDTKACPAEENVEAISQFFNTIGKQLDESPKSRRVNDLYFSRLKDLTTNSQLAPRLRFMVRDVLDLRANNWVPRREEVKAKTITEIHTEAEKNLGLRPGSIAMMRNGRNAEALGGLSPGGFPVARPGFGGMMPGMPGTRKMPGMPGLDSDNWEVPRSRSMPRGESGGHTQASARVQSPLISKTPSINSKYLPQGSGGVITGKTSALLQGSAASPARPSSIQGTQPVAHNPRPVAPVAPAVSSPPKPTAPAAVSHSADLHKKTVSLLEEYFSVRILDEALQCVEELKSPAYHPEVVKESLIIALEKIPPCVDPVVKLLEHLLHKNVLTAKDVGTGCLLYGSMMDDIGIDLPKAPNNFGEILGKLILIGGLDFTVVKEILKKLEDDYFQKSIFGGAMKSLNSSPSGEGILATQSVEIQACENLLA 791
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 44059927 44065751 - Maker00016124 Lcy9g1903 643019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy9g1903 791 MobiDBLite consensus disorder prediction 115 185 - -
Lcy9g1903 791 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 72 788 IPR045208 GO:0003729(PANTHER)|GO:0003743(InterPro)|GO:0003743(PANTHER)|GO:0016281(PANTHER)
Lcy9g1903 791 FunFam Eukaryotic translation initiation factor isoform 4G-2 204 439 - -
Lcy9g1903 791 MobiDBLite consensus disorder prediction 167 185 - -
Lcy9g1903 791 Gene3D - 622 780 - -
Lcy9g1903 791 ProSiteProfiles MI domain profile. 625 747 IPR003891 -
Lcy9g1903 791 SMART ma3_7 626 738 IPR003891 -
Lcy9g1903 791 Pfam MA3 domain 627 738 IPR003891 -
Lcy9g1903 791 SUPERFAMILY ARM repeat 206 441 IPR016024 -
Lcy9g1903 791 MobiDBLite consensus disorder prediction 511 559 - -
Lcy9g1903 791 Pfam MIF4G domain 213 438 IPR003890 GO:0003723(InterPro)|GO:0005515(InterPro)
Lcy9g1903 791 SMART if4_15 213 438 IPR003890 GO:0003723(InterPro)|GO:0005515(InterPro)
Lcy9g1903 791 MobiDBLite consensus disorder prediction 531 559 - -
Lcy9g1903 791 Gene3D - 204 439 - -
Lcy9g1903 791 MobiDBLite consensus disorder prediction 1 45 - -
Lcy9g1903 791 MobiDBLite consensus disorder prediction 576 594 - -
Lcy9g1903 791 SUPERFAMILY ARM repeat 623 777 IPR016024 -
Lcy9g1903 791 MobiDBLite consensus disorder prediction 576 621 - -
Lcy9g1903 791 MobiDBLite consensus disorder prediction 25 42 - -
Lcy9g1903 791 MobiDBLite consensus disorder prediction 115 131 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy2g0190 Lcy-Chr2:1486801 Lcy9g1903 Lcy-Chr9:44059927 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy9g1903 K03260 - csv:101211356 1256.12