Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy9g1903 | ATGCAGGCAGATCAGACGGGGATAAGTTTGAGACCAGGTGGCGGCGGTGGCCTTCGTGGAAGCAGATTTGTTACCCCTCGCTTCGATTCCTCCTCCGCCGATTCTTCGTCGCTTCGTCCTCATGGCGGCGTTTCGCAAATCCTCAAGGGCACTCAAGTACGTGTACCTGATGTAAATATGGACATAGAATATTATACTGGAGATCTACGGTTTGAAGGTCGTGAACGAATCCAGTACACTCGAGACCAGCTTCTGCAGCTCAGGGAGGTTGCAACAGTCCCTGAGGATATCTTGAAGGTCAAACTAGATGTTGAGACTGAGATTGTTGGAGAGGATCAAACATGGGCTCGTGCTGAAAGCAATCAGCAATCACAATCTCAAGGCCGTTACTTTGAGCCAGACAATCGAGATTGGCGTGGTCGATCTGGACAGTTACCTGCGTCCACGGAGGAAGGATTTTGGGAGGCAAGTCGCGAGAACAAGGATTTATCAGGACAATCTGAGTCGAGGTTCCAAGATTCAAATAATAGGAGCCAAGTTTCTGGTAACCAAGGGGTCGGTACTGCAACTGCCCTTATCAAGGCTGAAGTTCCTTGGTCAGTTAGAAGAGGTAATATCTCAGAAAAGGAACGTGTTTTGAAGACAGTAAAAGGTATACTTAATAAATTGACTCCAGAAAAGTTTGACGTACTCAAAGGTCAATTGATTGACTCTGGAATTACATCCGCTGATATTTTGAAGGATGTTATATCTCTTATATTTGAGAAGGCCGTGTTTGAGCCCACATTTTGCCCTATGTATGCACTGTTGTGCTCTGACCTTAACGAGAAGCTTCCTTCATTTTCATCTGATGAGCCTGGAGGGAAAGATATCACTTTTAAACGAGTTCTCTTAAATATTTGCCAAGAAGCATTTGAAGGTGCTGATAATCTGAGGGCAGAAATCAGGCAGATGACTAATCCTGAGCATGACTTGGAAAGAAGAGACAAAGAAAGAATGGTCAAGCTTCGAACTCTAGGTAACATTCGCCTGATAGGTGAGCTTCTAAAACAGAAGATGGTGCCTGAAAAGATCGTTCACCATATTGTTCTGGAGCTGTTGGGGCCTGACACTAAAGCATGCCCTGCTGAGGAGAATGTTGAGGCTATTAGTCAGTTTTTTAACACAATTGGTAAGCAGCTGGATGAGAGCCCAAAATCACGACGGGTCAATGATTTATATTTCAGCCGGTTGAAGGACCTCACTACAAACTCCCAACTAGCTCCTAGGTTGAGATTTATGGTCCGTGATGTTCTTGATTTACGGGCCAACAACTGGGTTCCCAGGCGTGAAGAGGTGAAAGCAAAAACCATCACTGAAATTCATACAGAGGCTGAGAAGAATCTAGGGCTTCGTCCGGGTTCAATTGCAATGATGAGAAATGGCCGTAATGCCGAGGCACTTGGGGGGTTAAGTCCTGGTGGTTTTCCTGTTGCTCGACCTGGTTTTGGGGGTATGATGCCCGGAATGCCTGGAACCAGGAAAATGCCTGGTATGCCTGGACTGGATTCAGACAATTGGGAGGTTCCTAGATCCCGATCAATGCCAAGGGGCGAAAGCGGAGGTCATACTCAGGCTTCCGCACGTGTCCAGTCACCATTAATCAGCAAAACACCTTCGATTAATTCAAAATATCTACCTCAGGGGAGTGGTGGTGTAATAACTGGTAAAACAAGTGCCTTGCTACAGGGTAGTGCTGCATCTCCTGCCCGACCAAGTTCCATCCAAGGAACTCAGCCTGTTGCTCACAACCCTAGACCGGTTGCTCCAGTTGCACCAGCCGTATCCTCCCCTCCGAAGCCAACAGCTCCTGCTGCAGTATCCCATTCTGCTGATCTTCACAAGAAAACCGTTTCGCTGCTTGAGGAATACTTCAGTGTACGGATTCTCGACGAAGCTCTACAGTGTGTAGAGGAGCTGAAATCTCCAGCTTATCACCCTGAGGTTGTTAAAGAATCTCTTATCATAGCACTCGAAAAGATTCCTCCATGTGTAGACCCAGTTGTTAAGCTTCTTGAGCACTTGCTTCACAAGAATGTCTTGACTGCAAAGGATGTAGGTACCGGATGCCTTCTATACGGATCAATGATGGATGATATTGGCATCGATCTACCAAAAGCACCAAACAATTTTGGTGAGATTCTCGGGAAGTTGATTTTGATCGGGGGTCTCGATTTCACGGTTGTGAAGGAGATTCTTAAGAAGCTGGAAGATGACTACTTCCAGAAATCCATTTTTGGTGGTGCTATGAAGAGCCTCAACTCTAGCCCTTCTGGAGAAGGAATTCTGGCAACTCAAAGTGTTGAGATCCAGGCATGTGAGAATTTACTTGCGTGA | 2376 | 46.3 | MQADQTGISLRPGGGGGLRGSRFVTPRFDSSSADSSSLRPHGGVSQILKGTQVRVPDVNMDIEYYTGDLRFEGRERIQYTRDQLLQLREVATVPEDILKVKLDVETEIVGEDQTWARAESNQQSQSQGRYFEPDNRDWRGRSGQLPASTEEGFWEASRENKDLSGQSESRFQDSNNRSQVSGNQGVGTATALIKAEVPWSVRRGNISEKERVLKTVKGILNKLTPEKFDVLKGQLIDSGITSADILKDVISLIFEKAVFEPTFCPMYALLCSDLNEKLPSFSSDEPGGKDITFKRVLLNICQEAFEGADNLRAEIRQMTNPEHDLERRDKERMVKLRTLGNIRLIGELLKQKMVPEKIVHHIVLELLGPDTKACPAEENVEAISQFFNTIGKQLDESPKSRRVNDLYFSRLKDLTTNSQLAPRLRFMVRDVLDLRANNWVPRREEVKAKTITEIHTEAEKNLGLRPGSIAMMRNGRNAEALGGLSPGGFPVARPGFGGMMPGMPGTRKMPGMPGLDSDNWEVPRSRSMPRGESGGHTQASARVQSPLISKTPSINSKYLPQGSGGVITGKTSALLQGSAASPARPSSIQGTQPVAHNPRPVAPVAPAVSSPPKPTAPAAVSHSADLHKKTVSLLEEYFSVRILDEALQCVEELKSPAYHPEVVKESLIIALEKIPPCVDPVVKLLEHLLHKNVLTAKDVGTGCLLYGSMMDDIGIDLPKAPNNFGEILGKLILIGGLDFTVVKEILKKLEDDYFQKSIFGGAMKSLNSSPSGEGILATQSVEIQACENLLA | 791 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 44059927 | 44065751 | - | Maker00016124 | Lcy9g1903 | 643019 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy9g1903 | 791 | MobiDBLite | consensus disorder prediction | 115 | 185 | - | - | |
Lcy9g1903 | 791 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA | 72 | 788 | IPR045208 | GO:0003729(PANTHER)|GO:0003743(InterPro)|GO:0003743(PANTHER)|GO:0016281(PANTHER) | |
Lcy9g1903 | 791 | FunFam | Eukaryotic translation initiation factor isoform 4G-2 | 204 | 439 | - | - | |
Lcy9g1903 | 791 | MobiDBLite | consensus disorder prediction | 167 | 185 | - | - | |
Lcy9g1903 | 791 | Gene3D | - | 622 | 780 | - | - | |
Lcy9g1903 | 791 | ProSiteProfiles | MI domain profile. | 625 | 747 | IPR003891 | - | |
Lcy9g1903 | 791 | SMART | ma3_7 | 626 | 738 | IPR003891 | - | |
Lcy9g1903 | 791 | Pfam | MA3 domain | 627 | 738 | IPR003891 | - | |
Lcy9g1903 | 791 | SUPERFAMILY | ARM repeat | 206 | 441 | IPR016024 | - | |
Lcy9g1903 | 791 | MobiDBLite | consensus disorder prediction | 511 | 559 | - | - | |
Lcy9g1903 | 791 | Pfam | MIF4G domain | 213 | 438 | IPR003890 | GO:0003723(InterPro)|GO:0005515(InterPro) | |
Lcy9g1903 | 791 | SMART | if4_15 | 213 | 438 | IPR003890 | GO:0003723(InterPro)|GO:0005515(InterPro) | |
Lcy9g1903 | 791 | MobiDBLite | consensus disorder prediction | 531 | 559 | - | - | |
Lcy9g1903 | 791 | Gene3D | - | 204 | 439 | - | - | |
Lcy9g1903 | 791 | MobiDBLite | consensus disorder prediction | 1 | 45 | - | - | |
Lcy9g1903 | 791 | MobiDBLite | consensus disorder prediction | 576 | 594 | - | - | |
Lcy9g1903 | 791 | SUPERFAMILY | ARM repeat | 623 | 777 | IPR016024 | - | |
Lcy9g1903 | 791 | MobiDBLite | consensus disorder prediction | 576 | 621 | - | - | |
Lcy9g1903 | 791 | MobiDBLite | consensus disorder prediction | 25 | 42 | - | - | |
Lcy9g1903 | 791 | MobiDBLite | consensus disorder prediction | 115 | 131 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy2g0190 | Lcy-Chr2:1486801 | Lcy9g1903 | Lcy-Chr9:44059927 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy9g1903 | K03260 | - | csv:101211356 | 1256.12 |