Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy9g1912 ATGCCAGAAACGGCGTCGTATTGGAAGATGTGCAAGCTTTTTACTCTTCTGCTTCTGTCTGTCCCGGCGACGGCGGCCTTATCGTTCGGCTTCTATGCTGCCACGTGTCCTGCGGCGGAGTTTATGGTCAGGAACACCGTCAGATCGGCTTCCTCCGTTGACCCCTCCGTCCCCGGCAAGCTCCTCCGGTTGCTCTTCCATGACTGTTTTGTTGAGGGGTGTGACGCTTCTGTATTGCTCCAAGGAAACGGAACAGAACGGACCGATCCGGCAAACGGGTCGCTGGGAGGATTTGAAGTAATCGATTCAGCTAAGAGAGCTCTGGAATTTTTCTGTCCTGGAACTGTTTCCTGTGCCGACATTGTCGTTTTGGCCGCCAGAGATGCCGTTGAATTCGTGAGTTCTTAG 408 53.68 MPETASYWKMCKLFTLLLLSVPATAALSFGFYAATCPAAEFMVRNTVRSASSVDPSVPGKLLRLLFHDCFVEGCDASVLLQGNGTERTDPANGSLGGFEVIDSAKRALEFFCPGTVSCADIVVLAARDAVEFVSS 135
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 44122367 44123464 + Maker00016668 Lcy9g1912 643028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy9g1912 135 SUPERFAMILY Heme-dependent peroxidases 22 133 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy9g1912 135 ProSiteProfiles Plant heme peroxidase family profile. 26 135 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy9g1912 135 Gene3D - 27 135 - -
Lcy9g1912 135 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy9g1912 135 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy9g1912 135 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy9g1912 135 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy9g1912 135 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy9g1912 135 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy9g1912 135 PANTHER PEROXIDASE 25-RELATED 24 132 IPR000823 GO:0004601(InterPro)|GO:0004601(PANTHER)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Lcy9g1912 135 Pfam Peroxidase 43 132 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy9g1912 Lcy-Chr9:44122367 Lcy4g0263 Lcy-Chr4:3176377 9.79E-39 dispersed
Lcy9g1912 Lcy-Chr9:44122367 Lcy13g1893 Lcy-Chr13:37882265 9.36E-33 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy9g1912 K00430 - csv:101211842 220.705