Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy9g2044 | ATGAGTTGCAACGGTTGCAGAGTTCTCCGTAAGGGCTGCAGCGAAGGTTGCGTTTTAAGGTCAAGTCTCCACTGGATTGACTCACCCGAAGCCCAAGGCAACGCCACCTTATTTCTCGCCAAATTCTTCGGCCGTAGTGATCTCTTGTCCTTCATCTCCGCCGTCCCCCATCATCAAAGACCCGCTCTGTTTCAGTCTCTGTTATTTGAAGCTTGCGGCCGCACGGTCAACCCGGTCAGCGGCGCCGTGGGGTTGTTATCGAGCGGGAACTGGCACGTCTGTCAGGCGGCGGCCGAGACCGTTCTCAGCGGAGGAGTTCTCCGGCCGATACCCGGAATCGAGCTTTCTGGAAATCCCACGCCCAACGTCGATGAATCCTCCATCACTTTCAATACGGATGTTTGGACCACCACCACACGGAATCTCCAATTTTACCCATCCATTCCGTCCGACTTCCGGCGGCTCTCCGATCTCGGCCTCGCCACTGGCAGAGGAAAGAATCATCCGTTGGAGAATCGGCGCTCTCTCGATTCAGAGGAGTCGGTGATGACCAGCTTTGGAAGCGGCGATCACGGCGACGGCTACCGGCGGAAAGAGACGAAGCTTTTGAACTTATTCATCTGA | 624 | 55.93 | MSCNGCRVLRKGCSEGCVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPHHQRPALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAAETVLSGGVLRPIPGIELSGNPTPNVDESSITFNTDVWTTTTRNLQFYPSIPSDFRRLSDLGLATGRGKNHPLENRRSLDSEESVMTSFGSGDHGDGYRRKETKLLNLFI | 207 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 45312270 | 45313610 | + | Maker00016269 | Lcy9g2044 | 643160 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy9g2044 | 207 | ProSiteProfiles | LOB domain profile. | 1 | 107 | IPR004883 | - | |
Lcy9g2044 | 207 | MobiDBLite | consensus disorder prediction | 163 | 193 | - | - | |
Lcy9g2044 | 207 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 38 | 1 | 128 | - | GO:0010468(PANTHER) | |
Lcy9g2044 | 207 | Pfam | Lateral organ boundaries (LOB) domain | 2 | 101 | IPR004883 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy2g0439 | Lcy-Chr2:3668471 | Lcy9g2044 | Lcy-Chr9:45312270 | 2.65E-39 | dispersed | |
Lcy7g0468 | Lcy-Chr7:4153870 | Lcy9g2044 | Lcy-Chr9:45312270 | 6.34E-46 | dispersed | |
Lcy9g0561 | Lcy-Chr9:18046838 | Lcy9g2044 | Lcy-Chr9:45312270 | 4.04E-25 | transposed | |
Lcy1g0925 | Lcy-Chr1:8066962 | Lcy9g2044 | Lcy-Chr9:45312270 | 4.04E-62 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
20715 | None | None | None | None | Lcy | TF |
Pathway information
