Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy9g2056 ATGACAAAATTCCGGCAAGATCCCGCCGTCTCCGTCGCATCGCGACAATTGTTGGGACGAAGAGTGAGTGATAGTAGTGAAGCCATGGGAGTTTTAGGAGCTATATTTTTATACATTCCACTGTTTTTAGTGTTGTACACATTAACAGAGCAGTTTCTTCACAAAATTCGAAACCTCCCGCCGACCCCTTTCCCGTCGGTTCCAGTCATCGGCCATCTCCACCTTCTGAAGAAGCCCCTCTACCGGACTTTGGCGAAGATCTCGAACCGGTACGGCCCGGTTGTCTTTCTCCGGTTCGGATCACGCCAAGTTCTCGTGGTGTCGTCTCCTTCCGCGGCCGAAGAATGTCTGACCAAGAACGACATCGTGTTTGCGAACCGGCCTCGCCTCCTCCTATCCAAGTGGTTCGGATACAACAACACGAACCTCGTCTGGTCATCGTATGGGGACCACTGGCGCAACCTCCGCCGAATCTCCACCGTTGAAGTCTTGTCCACTCATCGCCTTCAGATGCTCTCGACCGTCCGTCTGGAAGAGGTCAACTCTTTGATTCGGAGGCTCGCTAGAAGCGAAACCCAGGTGCATAACATGAAGAATGCGTTTTTCGATCTGACTTATAACATCATGTTGAGGATGATTGTCGGAAAGCGGTTTTACGGTGATGACGTGGACGATGCTGACGAGGCAAGATGTTATAGAGAGTTACAGGCTGAGTCAACTCGATTGAGTGGTAAGTCAAATATAGGAGATTTTATCCCGTTGATGTCGTGGCTGGGATTTGGATCGGCTGTGGAGAATGAGATAATGGAATGTCACAAAAGAAGAGACGCTTTCATGCAGAGTTTGATTGACCAGCAAAGGAAAAGAATGGTTCAAACTGAAACTGGAGATTCCTTTCGCGATGGAAGGAAGAAAACGATGATTGAAGTACTGTTAGAGCTACAAGAATCTCAACCTGAGCAGTACAATGACGAAACTATCAAAGCCTTGATGCTGGTTCTGTTGGCTGCAGGTACGGAAACATCAGTGAACACGATGGAATGGGCCCTATCTCTTATGTTGAACCAACCAGAAGTTTTAAAGAAAGCGCAGATCGAAATTGACTGTCAAGTTGGCCAAGACCGTCTGATTGACGAATCTGACGTGGCGAACCTTCCCTACCTACGTGGCATCATCAACGAAACCTTACGAATGTACCCTCCAGGTCCACTGATGGTACCCCACGAGTCATCAAAAGACTGTAGCGTTGGAGGATACCATATCCCACGTGGCACTATGCTGTACGTGAATTTATGGGCGATTCATAACGACCCCAAGAATTGGGGTGAGCCGAGAAAGTTTGATCCCGAGAGGTTTGAGAGGGTGGAAAGTGAGAAGTATGGGTTCAATCTGATGCCGTTCGGGGCGGGTAGAAGGGGCTGTCCAGGAGAGGGATTGGGGCTTCGCATGATTGGGCTTGTAATGGGCTCACTGATCCAGTGCTTTGAATGGGAGCGTCCTGGCGAGGAGTTGGTGGATATGACAGAAGGCATTGCAGTCTCTATGCCCAAGGCCCAACGCTTGCTCGCTAAATGTACGCCTCGACCCATTGCCGAACATCTTGATCTTTCTCCAACCAGATCCAACCCGGCCCATTATAAAAATTGA 1647 49.24 MTKFRQDPAVSVASRQLLGRRVSDSSEAMGVLGAIFLYIPLFLVLYTLTEQFLHKIRNLPPTPFPSVPVIGHLHLLKKPLYRTLAKISNRYGPVVFLRFGSRQVLVVSSPSAAEECLTKNDIVFANRPRLLLSKWFGYNNTNLVWSSYGDHWRNLRRISTVEVLSTHRLQMLSTVRLEEVNSLIRRLARSETQVHNMKNAFFDLTYNIMLRMIVGKRFYGDDVDDADEARCYRELQAESTRLSGKSNIGDFIPLMSWLGFGSAVENEIMECHKRRDAFMQSLIDQQRKRMVQTETGDSFRDGRKKTMIEVLLELQESQPEQYNDETIKALMLVLLAAGTETSVNTMEWALSLMLNQPEVLKKAQIEIDCQVGQDRLIDESDVANLPYLRGIINETLRMYPPGPLMVPHESSKDCSVGGYHIPRGTMLYVNLWAIHNDPKNWGEPRKFDPERFERVESEKYGFNLMPFGAGRRGCPGEGLGLRMIGLVMGSLIQCFEWERPGEELVDMTEGIAVSMPKAQRLLAKCTPRPIAEHLDLSPTRSNPAHYKN 548
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 45366291 45370354 - Maker00016936 Lcy9g2056 643172
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lcy9g2056 548 PRINTS P450 superfamily signature 390 401 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g2056 548 PRINTS P450 superfamily signature 337 354 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g2056 548 PRINTS P450 superfamily signature 465 474 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g2056 548 PRINTS P450 superfamily signature 474 485 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g2056 548 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 467 476 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Lcy9g2056 548 PANTHER CYTOCHROME P450 82C3-RELATED 41 528 IPR050651 -
Lcy9g2056 548 FunFam Cytochrome P450 family protein 52 531 - -
Lcy9g2056 548 PRINTS E-class P450 group I signature 326 343 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g2056 548 PRINTS E-class P450 group I signature 430 454 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g2056 548 PRINTS E-class P450 group I signature 88 107 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g2056 548 PRINTS E-class P450 group I signature 389 407 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g2056 548 PRINTS E-class P450 group I signature 204 222 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g2056 548 PRINTS E-class P450 group I signature 474 497 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g2056 548 PRINTS E-class P450 group I signature 464 474 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g2056 548 PRINTS E-class P450 group I signature 112 133 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g2056 548 PRINTS E-class P450 group I signature 346 372 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g2056 548 CDD CYP81 92 521 - -
Lcy9g2056 548 Gene3D Cytochrome P450 54 534 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g2056 548 Coils Coil 180 200 - -
Lcy9g2056 548 Pfam Cytochrome P450 61 517 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g2056 548 SUPERFAMILY Cytochrome P450 60 528 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy9g2056 Lcy-Chr9:45366291 Lcy13g1039 Lcy-Chr13:22711472 4.52E-147 dispersed
Lcy9g2056 Lcy-Chr9:45366291 Lcy9g2057 Lcy-Chr9:45371539 1.62E-221 tandem
Lcy9g1967 Lcy-Chr9:44621530 Lcy9g2056 Lcy-Chr9:45366291 9.26E-30 transposed
Lcy13g2119 Lcy-Chr13:40112853 Lcy9g2056 Lcy-Chr9:45366291 4.76E-183 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy9g2056 - - - 0.0