Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lcy9g2057 | ATGGCCATCCCATTTTTATACCTTTTGATCTTATTAACACTTCACATCTTCACAAATCACTTCCTTCACAGAATCCGAAACCTCCCCCCGAGCCCATTTCTTTCTCTACCCATAATAGGCCAACTCTACCTCCTCAAACGCCCTCTTCACCGGACCCTATCGGAAATCTCCCGCCGGCATGGCCCAATTCTCTTCTTCCGGTTCGGATTCCGCCCAGTCTTGGTCGTCTCATCCCCGTCAGCCGCCGAGGAGTGCCTCTCCAAAAATGACGTCGTGTTCGCCAACCGCCCTCGTCTGATAGGCGGCAAATACCTCGGGTACAATTACACGAGCCTCCTCTGGGCGCCCTATGGCGAGCACTGGCGAAACCTCCGCCGAATCTCATCGTTAGAAATCTTCTCCACCCACCGCCTCCAGACGCTCTCCAGTATTCGCCTCGATGAAATCCGCATGATGATTCGGAGGTTGTACAGCGCCAAAAACGACGTCGTGGACCTGAGAACAGAGTTTTTCGAGCTGATGTTCAATATCATGATGAGAATGATTGCAGGAAAACGGTATTATGGGGAGCACGTGGCGGACTCGGAGGAGGCAGGGAGATTTCGCGAGCTTCAAGAGGAAACGTTTCGGTTGAGTAGCAAAACTAATTTGGGGGACTTTTTGCGGGTTGTGAGGTGGGTTGGATTCTCTAAAGGGCTCGAAAATAGTATGAGGGAGTTGCAAATCAAAAGGGATGTTTGGATGCAGAGTTTGATCGAAGAACATCGGAAACATATGAAAGATAGTAATTGTTGTTCTAACGAAAAGGATGGTAAAAAGACCATGATTGAAGTTCTCCTGTCGTTGCAAGAAACGGAACCTGAGTATTATAAGGACGATGTTATCCGAGGCCTCATGCTCGTGTTGCTGTTAGCAGGAACAGAGGGTTCCATCAATACAATGGAGTGGCTGCTGTCACTATTACTCAACCACCCAGAGAGTCTTCGAAGGGCCCAAAAGGAAATCGACGACGTCGTGGGAAGATCCAACCGGATCGTGGAGGAATCGGACCTGGCCCATCTTCCTTACCTGCGTAGCCTGATCAACGAGACTCTGAGAATGTACCCGCCCGGCCCATTACTGATCCCCCACGAATCATCAGAGGACTGCCACGTGGGAGGGTTCCAGGTCCCAGCTGGCACGACGCTGTTCGTAAACGTGTGGGCCATCCAAAACGACCCCAGCGTGTGGGTGGAGCCGGAGAAATTCAACCCGGACCGATTTGGAAGCGAGGGAGAGGGGTTCAAGTGGATGCCATTTGGGGCCGGGAGGAGGGGGTGTCCCGGCGAGGGCTTGGGGCTGCGCGTGGTTGGATTGGCCGTCGGATCGCTGGTTCAGTGCTTTGAGTGGGAGGCAGTAGGTGGAAAAGCTATTGATATGAGCGAAGGTGTTGGACTCACCTTGCCTAAAGCTCTCCCCCTCCACGCCCTTTGTCGACCTCGTTCAAATGTCGCACATTTAATTCCTCAGATCTTATGA | 1518 | 52.11 | MAIPFLYLLILLTLHIFTNHFLHRIRNLPPSPFLSLPIIGQLYLLKRPLHRTLSEISRRHGPILFFRFGFRPVLVVSSPSAAEECLSKNDVVFANRPRLIGGKYLGYNYTSLLWAPYGEHWRNLRRISSLEIFSTHRLQTLSSIRLDEIRMMIRRLYSAKNDVVDLRTEFFELMFNIMMRMIAGKRYYGEHVADSEEAGRFRELQEETFRLSSKTNLGDFLRVVRWVGFSKGLENSMRELQIKRDVWMQSLIEEHRKHMKDSNCCSNEKDGKKTMIEVLLSLQETEPEYYKDDVIRGLMLVLLLAGTEGSINTMEWLLSLLLNHPESLRRAQKEIDDVVGRSNRIVEESDLAHLPYLRSLINETLRMYPPGPLLIPHESSEDCHVGGFQVPAGTTLFVNVWAIQNDPSVWVEPEKFNPDRFGSEGEGFKWMPFGAGRRGCPGEGLGLRVVGLAVGSLVQCFEWEAVGGKAIDMSEGVGLTLPKALPLHALCRPRSNVAHLIPQIL | 505 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 45371539 | 45373647 | - | Maker00017000 | Lcy9g2057 | 643173 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lcy9g2057 | 505 | SUPERFAMILY | Cytochrome P450 | 29 | 494 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy9g2057 | 505 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 433 | 442 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lcy9g2057 | 505 | CDD | CYP81 | 61 | 487 | - | - | |
| Lcy9g2057 | 505 | PRINTS | E-class P450 group I signature | 173 | 191 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy9g2057 | 505 | PRINTS | E-class P450 group I signature | 314 | 340 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy9g2057 | 505 | PRINTS | E-class P450 group I signature | 358 | 376 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy9g2057 | 505 | PRINTS | E-class P450 group I signature | 440 | 463 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy9g2057 | 505 | PRINTS | E-class P450 group I signature | 399 | 423 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy9g2057 | 505 | PRINTS | E-class P450 group I signature | 57 | 76 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy9g2057 | 505 | PRINTS | E-class P450 group I signature | 81 | 102 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy9g2057 | 505 | PRINTS | E-class P450 group I signature | 430 | 440 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy9g2057 | 505 | Gene3D | Cytochrome P450 | 23 | 501 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy9g2057 | 505 | PANTHER | CYTOCHROME P450 82C3-RELATED | 13 | 494 | IPR050651 | - | |
| Lcy9g2057 | 505 | PRINTS | P450 superfamily signature | 359 | 370 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy9g2057 | 505 | PRINTS | P450 superfamily signature | 431 | 440 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy9g2057 | 505 | PRINTS | P450 superfamily signature | 440 | 451 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy9g2057 | 505 | PRINTS | P450 superfamily signature | 305 | 322 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy9g2057 | 505 | Pfam | Cytochrome P450 | 30 | 482 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy9g2057 | 505 | FunFam | Cytochrome P450 family protein | 21 | 497 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lcy13g2119 | Lcy-Chr13:40112853 | Lcy9g2057 | Lcy-Chr9:45371539 | 3.85E-194 | dispersed | |
| Lcy9g1588 | Lcy-Chr9:41093125 | Lcy9g2057 | Lcy-Chr9:45371539 | 5.37E-201 | dispersed | |
| Lcy9g2057 | Lcy-Chr9:45371539 | Lcy9g2060 | Lcy-Chr9:45393459 | 1.07E-168 | dispersed | |
| Lcy9g2056 | Lcy-Chr9:45366291 | Lcy9g2057 | Lcy-Chr9:45371539 | 1.62E-221 | tandem |
Pathway information