Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy9g2149 | ATGAAGGGTTCGGGGTGTTGTTTGTTCGTCTCTCTTCTTCTTCTATCTTCTTTTACATTTTTCTCTTCGGCTCTTTCCGATGCCGAAGCTTCTTTCATTGCCCGCCGCCAACTTTTAACCCTTCATAAGAACCATGATTTGCCCGACGATTATGAGTCCACAATCCAAGTCAACGAGATCTTCCCCAATCCCCGCCTCCGCCGAGCTTTCATCGCCCTTCAAGCCTGGAAGAAGGCCATTTATTCCGACCCTTTTAACACCACCGCCAATTGGGTCGGCGCCGATGTATGCTCCTACACTGGAGTTTTCTGCGCCCCTGCTCTCGACGACAACAAAATCGAAGTCGTCGCCGGAATCGACCTCAACCATGCCGACATCGCCGGTTACCTGCCCGTCGAGCTCGGTTTGCTGACTGACATTGCGTTGTTTCACATCAACACCAATCGATTCTGCGGCATTGTCCCCTCCAGCTTCTCGAGGCTGATTCTGCTTCACGAACTCGACATTAGCAACAACCGATTCGTTGGCTACTTCCCAGAAGTTGTTGTGAGGATTCCAAATTTGAAATATCTCGACATAAGATACAATGAATTTGAAGGCGAATTGCCTCCTGCGCTTTTCACCAAGGAACTGGATGTAATTTTAATCAATAACAATCGATTCACCTCCTCCATTCCAGAGAATTTTGGGGACTCACCGGCGGCCATAATTGTGATCGCCAACAACAATTTCACTGGCTGCATTCCGAAAAGTATTGGAAAAATGGGGAACACGTTGAACCAGTTTGTAATGTTGAACAATGAATTGGCGGGTTGTTTGCCTGCTGAGATTGGACTGCTTGGAAATGCAACGGTTATTGATGTTTCGTCGAATAAATTGAGTGGGATCTTGCCGACGAGCTTCGATGGGTTGAAGAATGTCGAGATTTTGAATATTTCTTCGAATTTTTTGACTGGGGTTGTGCCGGAGGGGGTGTGTAATTTGCCCAAATTGGGTAATTTCACATTCTCTTTCAATTACTTTAATGGCGAGGCGGATAGATGCATGCCGCAGAAGAGAACAGATATTTTGTTGGATGATGTCGAGAATTGCTTGCCGGAGAGGCCCATGCAGAAGGCAGCCGACACTTGTGGTCCAGTTATTAGCAAGAAAGTTGATTGCAGTAAGGATAAGTGCAGCGGAGGACCGTCACCAGCACCGAAGCCTCAAACCCCACCTTCCGCTGATGATTCTCCGCCACCAGTTCACTCTCCACCACCACAAGTTTCATCATCCCCACCACCGGTTCACTCTCCACCACCACAAGTTTCATCACCCCCACCGCCGGTTTCATCACCCCCACCACCGGTTCACTCTCCACCACCTCCAATTTCATCACCCCCACCACCGATTCACTCTCCACCACCGCCGATTTCATCACCCCCACCACCGGTTCACTCTCCACCACCGCCAGTTTCATCACCCCCACCACCACCGGTTTCATCACCTCCACCGCCTGTTCACTCTCCACCACCACCAGTTTCATCCCCACCACCGCCCGTTCATTCTCCACCACCACCACCAGTTTTCTCACCCCCACCACCGGTTTATTCTCCACCACCACCACCAGTTTTCTCACCCCCACCACCGGTTTACTCTCCACCACCATCACCACCAGTGCACTCACCTCCACCTCCAGTCCAATCTCCTCCACCTCCGGTATTCTCTCCGCCGCCACCTTCTCCATTTCCATCTCCTCCTCCTCCAGTCGCCTCTCCACCGCCTCCACTAGAAGACATCATCCTTCCGCCAAACATTGGCTTCCAGTACTCATCACCGCCTCCACCAATGTTTCAGGGCTACTAA | 1845 | 50.84 | MKGSGCCLFVSLLLLSSFTFFSSALSDAEASFIARRQLLTLHKNHDLPDDYESTIQVNEIFPNPRLRRAFIALQAWKKAIYSDPFNTTANWVGADVCSYTGVFCAPALDDNKIEVVAGIDLNHADIAGYLPVELGLLTDIALFHINTNRFCGIVPSSFSRLILLHELDISNNRFVGYFPEVVVRIPNLKYLDIRYNEFEGELPPALFTKELDVILINNNRFTSSIPENFGDSPAAIIVIANNNFTGCIPKSIGKMGNTLNQFVMLNNELAGCLPAEIGLLGNATVIDVSSNKLSGILPTSFDGLKNVEILNISSNFLTGVVPEGVCNLPKLGNFTFSFNYFNGEADRCMPQKRTDILLDDVENCLPERPMQKAADTCGPVISKKVDCSKDKCSGGPSPAPKPQTPPSADDSPPPVHSPPPQVSSSPPPVHSPPPQVSSPPPPVSSPPPPVHSPPPPISSPPPPIHSPPPPISSPPPPVHSPPPPVSSPPPPPVSSPPPPVHSPPPPVSSPPPPVHSPPPPPVFSPPPPVYSPPPPPVFSPPPPVYSPPPSPPVHSPPPPVQSPPPPVFSPPPPSPFPSPPPPVASPPPPLEDIILPPNIGFQYSSPPPPMFQGY | 614 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 46106652 | 46108496 | - | Maker00007291 | Lcy9g2149 | 643265 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy9g2149 | 614 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 9 | 515 | IPR051582 | - | |
Lcy9g2149 | 614 | Pfam | Leucine Rich Repeat | 187 | 206 | IPR001611 | GO:0005515(InterPro) | |
Lcy9g2149 | 614 | MobiDBLite | consensus disorder prediction | 540 | 614 | - | - | |
Lcy9g2149 | 614 | MobiDBLite | consensus disorder prediction | 386 | 526 | - | - | |
Lcy9g2149 | 614 | Gene3D | Ribonuclease Inhibitor | 70 | 365 | IPR032675 | - | |
Lcy9g2149 | 614 | Pfam | Leucine rich repeat | 284 | 339 | IPR001611 | GO:0005515(InterPro) | |
Lcy9g2149 | 614 | MobiDBLite | consensus disorder prediction | 398 | 526 | - | - | |
Lcy9g2149 | 614 | MobiDBLite | consensus disorder prediction | 540 | 594 | - | - | |
Lcy9g2149 | 614 | FunFam | Leucine-rich repeat extensin-like protein 1 | 70 | 231 | - | - | |
Lcy9g2149 | 614 | PRINTS | Proline rich extensin signature | 449 | 474 | - | - | |
Lcy9g2149 | 614 | PRINTS | Proline rich extensin signature | 412 | 428 | - | - | |
Lcy9g2149 | 614 | PRINTS | Proline rich extensin signature | 429 | 446 | - | - | |
Lcy9g2149 | 614 | PRINTS | Proline rich extensin signature | 391 | 412 | - | - | |
Lcy9g2149 | 614 | Pfam | Leucine rich repeat N-terminal domain | 72 | 104 | IPR013210 | - | |
Lcy9g2149 | 614 | SUPERFAMILY | L domain-like | 71 | 344 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy9g2147 | Lcy-Chr9:46089140 | Lcy9g2149 | Lcy-Chr9:46106652 | 4.29E-193 | proximal |
Pathway information
