Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lcy9g2180 | ATGGAGCAACGAAGAACCGATCAGTCGATCACAGACCTTCCTTTACTTCTCTTGCAGTGGCTTTTCCATTTCCCAATGCATCTTCTTCTTGTTTCCGTTCTTCTTCTTCTTGCAATCCTCCTCAAATTTCTCTACTCCACTCTCTGGCTTCCATGGAGAATTCAACTCCACTTCCGAAAGCAGGGCATAACGGGCCCTCCCTACCGTCCGATCATCGGTAACTCCGCCGATATCCGCCGTCTGTTCGCGGAGGCGCAATCCAAGCCGCTTCCGTTTCACCACGACATACTCTGCCGCGCTCTCCCTTTTTACTTCCGGTGGTCCGGAGAGTACGGGAAGACGTTTCTGTACTGGTTCGGGTCGAAACCGAGACTGGCCCTATCCGACCCGGATCTGATTAAGGAAGTGCTTGTGAATACGCGCGGATCTTTTCGAAGGATCCAGTTCAACCCGCTGTCGAAGGTGCTTTTTGGAGAGGGACTTGTCGGACTGGAGGGCGAGAAATGGGTCGCGCGCCGGAGAATTGCAAATCAGGCTTTCAACATCGAGCGTGTAAAGGGGTGGGTACCTGAAATTGTTTCTAGTGTGTCGAATTTGTTGGAGAAATGGGAAGAGATGAAGGGGGGAATGGAGGAGTTTGAATTGGACGTCCATAAAGAACTTCGTCGCCTTTCAGCAGACGTAATTTCAAGAACTGCATTTGGAAGTAACTTTGAAGAAGGCAAGCGCATCTTCAATTTGCAAGAACAGCAAACACATCTTTTCTCCCAGGCAGTCAGAAGTGTTTATTTTCCTGGCTTCAGATTTTTGCCTACTAAGAAGAACAGAGAAAGATGGAGCCTGGAGAAAGAAACTCGTGAATCGATAAGAGTGTTGATTGAGACAAACAGCAAAGGAAGGGAAAACTCAACTAATCTACTCAGCCTGTTAATGTCATCGTACAAGAACCAGAATGGGGAAGAAGAAAGACTTGGAGTGGAGGAAATCATTGATGAATGCAAGACATTCTATTTTGCAGGAATGGAAACAACAGCTCATCTTTTAACTTGGGCCCTTCTGCTGCTAGCAAAGCATCAAGAATGGCAAGACAAGGCCCGAGAAGAAGTTCTCGACGTCTGCGGGCATAAAACACCTCCTGCAGCAGAGAATTTGAGTGAACTTAAACTTGTAGGTATGATAATCAACGAAACACTTCGACTTTATCCTCCAGCGGTGATGTTAACGAGGCGGGCATCGAAACAGCTGACACTAGGAAGCTTAGACATTCCTGCTGGCACAGAGCTCTTCATGGCATTGGCTGCTGTCCACCATGACAAAGATATTTGGGGAGAAGATGCAAACAGCTTCAACCCTTTGAGATTTGGTGAGCCTCGGAAACATTTAGCTTCGTTTCTTCCATTTTCGTTGGGTCCCAGAATTTGTGTAGGCCAAAACTTGGCGTTGATTGAGGCTAAAGTCGCCCTGGCCATGATAATTCAACGGTTCTCTCTTGCTGTTTCTCCAACCTACACTCATGCCCCAATGCTGTTTATAACTTTACAGCCACAGTTTGGTGCTCAGCTCATCGTTAGAAGCTTATGA | 1581 | 47.12 | MEQRRTDQSITDLPLLLLQWLFHFPMHLLLVSVLLLLAILLKFLYSTLWLPWRIQLHFRKQGITGPPYRPIIGNSADIRRLFAEAQSKPLPFHHDILCRALPFYFRWSGEYGKTFLYWFGSKPRLALSDPDLIKEVLVNTRGSFRRIQFNPLSKVLFGEGLVGLEGEKWVARRRIANQAFNIERVKGWVPEIVSSVSNLLEKWEEMKGGMEEFELDVHKELRRLSADVISRTAFGSNFEEGKRIFNLQEQQTHLFSQAVRSVYFPGFRFLPTKKNRERWSLEKETRESIRVLIETNSKGRENSTNLLSLLMSSYKNQNGEEERLGVEEIIDECKTFYFAGMETTAHLLTWALLLLAKHQEWQDKAREEVLDVCGHKTPPAAENLSELKLVGMIINETLRLYPPAVMLTRRASKQLTLGSLDIPAGTELFMALAAVHHDKDIWGEDANSFNPLRFGEPRKHLASFLPFSLGPRICVGQNLALIEAKVALAMIIQRFSLAVSPTYTHAPMLFITLQPQFGAQLIVRSL | 526 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 46464919 | 46467755 | - | Maker00007241 | Lcy9g2180 | 643296 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lcy9g2180 | 526 | Pfam | Cytochrome P450 | 106 | 502 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy9g2180 | 526 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 467 | 476 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lcy9g2180 | 526 | Gene3D | Cytochrome P450 | 49 | 525 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy9g2180 | 526 | FunFam | Cytochrome P450 734A1 | 48 | 526 | - | - | |
| Lcy9g2180 | 526 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 37 | 518 | IPR050665 | GO:0004497(PANTHER) | |
| Lcy9g2180 | 526 | SUPERFAMILY | Cytochrome P450 | 59 | 524 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy9g2180 | 526 | PRINTS | P450 superfamily signature | 339 | 356 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy9g2180 | 526 | PRINTS | P450 superfamily signature | 392 | 403 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy9g2180 | 526 | PRINTS | P450 superfamily signature | 465 | 474 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy9g2180 | 526 | PRINTS | P450 superfamily signature | 474 | 485 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy9g2180 | 526 | PRINTS | E-class P450 group I signature | 464 | 474 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy9g2180 | 526 | PRINTS | E-class P450 group I signature | 348 | 374 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy9g2180 | 526 | PRINTS | E-class P450 group I signature | 328 | 345 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy9g2180 | 526 | PRINTS | E-class P450 group I signature | 474 | 497 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy9g2180 | 526 | PRINTS | E-class P450 group I signature | 224 | 242 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy9g2180 | 526 | PRINTS | E-class P450 group I signature | 108 | 127 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lcy10g2131 | Lcy-Chr10:45360102 | Lcy9g2180 | Lcy-Chr9:46464919 | 4.41E-123 | dispersed | |
| Lcy12g0155 | Lcy-Chr12:1930288 | Lcy9g2180 | Lcy-Chr9:46464919 | 1.33E-98 | dispersed | |
| Lcy2g0764 | Lcy-Chr2:6760202 | Lcy9g2180 | Lcy-Chr9:46464919 | 7.43E-147 | dispersed | |
| Lcy4g2132 | Lcy-Chr4:47847776 | Lcy9g2180 | Lcy-Chr9:46464919 | 2.97E-139 | dispersed | |
| Lcy9g1421 | Lcy-Chr9:39208785 | Lcy9g2180 | Lcy-Chr9:46464919 | 5.26E-126 | dispersed | |
| Lcy9g1423 | Lcy-Chr9:39233141 | Lcy9g2180 | Lcy-Chr9:46464919 | 5.09E-136 | dispersed | |
| Lcy9g2180 | Lcy-Chr9:46464919 | Lcy13g1039 | Lcy-Chr13:22711472 | 8.20E-105 | dispersed | |
| Lcy9g2180 | Lcy-Chr9:46464919 | Lcy9g2181 | Lcy-Chr9:46468297 | 1.21E-293 | tandem | |
| Lcy7g0114 | Lcy-Chr7:1028546 | Lcy9g2180 | Lcy-Chr9:46464919 | 7.77E-18 | wgd |
Pathway information