Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy9g2181 AAACCAAAAAGCAAAAACCAATCAGAGACCTTCCCAATGTATCTTCTTCTTCTTCTTCTTCTCACAATCCTCTTCAAATTTCTCTACTCCAATTTTTGGGTTCCATGGAGAATTCAAATCCACTTCCGAAACCAGGGGATAACCGGCCCTTCCTACCGTCCGATCACTGGTAACGCCGTCGAGATCCGCCGTCTGTACGCGGAGGCGGAATCCAAGCCGATTCAGTTTAACCACGATATACTGTGTCGTGTGCTGCCTTATATTCACCGGTGGTCCGGCGAGTATGGAAAGACGTTTCTGTACTGGTTCGGGTCGAACCCGAGACTGGTCATATCCGACCCGGATATGATTAAGGATGTGCTTACGAATACGGGCGGGCCCTTCAGAAAGGTCGGGTTCAACCCGCTTTCGAAGTTGCTCTTCGGAGAGGGACTTGTCGGACTCGACGGCGAAAAATGGGTCGTCCACCGGAGGATCGCAAATCAGGCTTTCACTATCGAGCGCGTAAAGGGTTGGTTATCGGAGATTGTTGAAAGTGTGTGTAATGAGTTGGAGAAATGGGAAGAGATGAAGGGAGGAAAGAAGGAGTTTGAATTGGACGTCCATAAACAACTTCGTCTCCTCTCAGCAGACGTAATTTCAAGAACTGCTTTTGGAAGTGATTATGAAGAAGGCAAACGCATCTTCAATTTGCAAGAAAAGCAAATGCATCATTTTCTCGAGGCAGTCACAAGTATTTATATTCCTGGTTTCAGATTTTTGCCTACCAAGAAGAACAGAGAGAGGCAGAGATTGGAGAAGGAAACTCGTGAATCAATAAAAGCGTTGATTGAGAGTGAGGCAAACAGCAAAGGGAGGGAAAACTCAACTAATCTACTCAGCTTGTTGATGTCACCTTACAAGAACAAGAATGGAGAAGAAGAAAAACTTGGAGTGGAGGAAATCATAAACGAATGCAAGACATTCTATTTTGCAGGAATGGAAACAACGGCTAATCTCTTAACTTGGGCCCTTCTTCTACTAGCAAAGCATCAAGAATGGCAAAACAAAGCTCGAGAAGAAATTATCAACGTCTGCGGGCGTAAGACACCGCCTGCAGCAGATAATTTAAGCGAGCTTAAACTAGTGGGTATGATAATCAATGAAACGCTTCGACTTTACCCTCCAGCGACGATGGTGATGAGACGGGCTTCGAAGCGGCTGACGCTAGGGAACGTTGAGGTTCCGGAAGGCACACAGCTGCAAATTTCGTTGGCTGCTATCCACCATGACAAGGAGCTTTGGGGAGAAGATGCCAATAGCTTCAACCCTTTGAGATTTTGTGAGGCACGGAAGCATTTGGCTTCGTTTGTGCCATTTTCGTTGGGTCCTAGAATCTGTGTAGGCCAGAATTTGGCTTTGGTTGAGGCCAAAATTGCCTTGGCCATGATAGTGCAGCGATTCTCTCTCTCTGTTTCTCCAGCCTACGCTCATGCTCCCAAGATGTTTGTAAGCTTACAGCCTCAGTTTGGTGCTCAGCTCTTCGTTAGGAGCTTGTGGGAGTGA 1545 46.54 KPKSKNQSETFPMYLLLLLLLTILFKFLYSNFWVPWRIQIHFRNQGITGPSYRPITGNAVEIRRLYAEAESKPIQFNHDILCRVLPYIHRWSGEYGKTFLYWFGSNPRLVISDPDMIKDVLTNTGGPFRKVGFNPLSKLLFGEGLVGLDGEKWVVHRRIANQAFTIERVKGWLSEIVESVCNELEKWEEMKGGKKEFELDVHKQLRLLSADVISRTAFGSDYEEGKRIFNLQEKQMHHFLEAVTSIYIPGFRFLPTKKNRERQRLEKETRESIKALIESEANSKGRENSTNLLSLLMSPYKNKNGEEEKLGVEEIINECKTFYFAGMETTANLLTWALLLLAKHQEWQNKAREEIINVCGRKTPPAADNLSELKLVGMIINETLRLYPPATMVMRRASKRLTLGNVEVPEGTQLQISLAAIHHDKELWGEDANSFNPLRFCEARKHLASFVPFSLGPRICVGQNLALVEAKIALAMIVQRFSLSVSPAYAHAPKMFVSLQPQFGAQLFVRSLWE 514
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 46468297 46471850 - Maker00007294 Lcy9g2181 643297
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lcy9g2181 514 Gene3D Cytochrome P450 32 511 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g2181 514 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g2181 514 PRINTS E-class P450 group I signature 92 111 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g2181 514 PRINTS E-class P450 group I signature 208 226 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g2181 514 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g2181 514 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g2181 514 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g2181 514 PANTHER CYTOCHROME P450 FAMILY MEMBER 20 504 IPR050665 GO:0004497(PANTHER)
Lcy9g2181 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Lcy9g2181 514 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g2181 514 PRINTS P450 superfamily signature 460 471 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g2181 514 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g2181 514 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g2181 514 Pfam Cytochrome P450 88 490 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g2181 514 SUPERFAMILY Cytochrome P450 79 509 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy9g2181 Lcy-Chr9:46468297 Lcy13g1039 Lcy-Chr13:22711472 6.47E-104 dispersed
Lcy9g2180 Lcy-Chr9:46464919 Lcy9g2181 Lcy-Chr9:46468297 1.21E-293 tandem
Lcy7g0109 Lcy-Chr7:1004262 Lcy9g2181 Lcy-Chr9:46468297 1.29E-17 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy9g2181 - - - 0.0