Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy9g2281 ATGCACAGCATTTCTTTTTGTTTCTTCGTTTTGGTTTGTGCCATCTTTTTCCTTCTCTCTGAAAATGGTGAAATAGCTGCGGCTGCTCAAGGTGGAAACAATGGCGTTTACATCGTCTACATGGGATCGGCGTCTGGTTCGAGGACCGACTTCCTTCGCCTTCTTAACTCTGTCAACAGGAACCGAAATGCAGTGGTGCACACGTATAAACATGGATTTACAGGATTTGCAGCTCGAATATCGGAACAGGAAGCCGAGGCCATGAGACATAGACCTGGAGTTGTTTCGGTTTTTCCAGATCCTCTGTTGAAGTTGCACACAACTCATTCGTGGGATTTCTTGATCAGTCAGACAAGTGTGAAGATCGATGCCAATCCCAAATCCGATCCCCCGAGCTATTCCTCTCAACCATACGATACCATTATCGGCATCTTGGACACCGGAATCTGGCCTGAATCGGAGAGTTTTAACGACAAAGGTATGAAGCCAATACCGTCGAGGTGGAAAGGTACCTGCATGGTAGGCAATGACTTCACCTCCTCCAACTGTAATAAAAAAATCATTGGAGCAAGATTTTACGAAAGTTCTGAGAGCGACGGGATACAGTACCACTCACCTCGAGACGAAGCTGGACATGGCACACACGTGGCTTCAACGGCAGCCGGCAGCGCCGTGGCTAATGCTTCCTACTATGGCCTCGCAGCTGGGACGGCCAAGGGCGGCTCCCCCGGCTCAAGGATCGCCATGTATAGAGTCTGTATGGCCGACGGCTGCCGTGGGTCAGCCATCATGGCGGCGTTTGACGATGCCATCGCCGATGGGGTCGATTGCTTGTCCTTATCTCTCGGTACACCCTACTACTTCAAACAGGGACTGAAGGACGACCCTATTGCCATTGGGGCCTTTCATGCAGTTGAGAAGGGGATTGTAGTTGTCTGCTCTGCTGGAAACGACGGCCCCACCTCTGGATCGGTGGTGAATGACGCGCCATGGATTTTAACAGTAGCTGCCTCCACCATTGATCGGGTTTTTGAATCTGATGTTGTGATGGGCAACAAAAAAGTGATCAAGGGAGAAGGTATAAATTTCTCTGCTCTGAAAAAATCCCCTGTATACCCACTGATACAAGGCAAATCAGCCAAGAAAGGGGATGCCAGTGAAGAGAGTGCGAGGATTTGTTCTGAAGACTCCATGGACGAAGCTCTGGTGAAGGGGAAGATAGTTATATGCGAAAGCAATGTCGAAGGAGGCGGTTCCAATTGGCAGGGTCAGGCTGAAACGGTGAAGAGTCTTGGAGGGATCGGTGTAGTTTTGATTGATGACCAATCAAAATTAATTGCAGAGAAGTTTGGAACTTTTCCCATGACAGCTATTGGCTCAAAGGATGGTGCTGAGGTCCTCTCCTATGTCAAGTCAAGCGGGAATCCAGTTGCTACAATCCTACCCTCCGTGACCATAATCAACTATAAGCCAGCGCCTGCTATAGCGTACTTTTCATCTAGAGGGCCTAATCCCGCAGTACTAAACATAATGAAGCCGGACATATCAGCACCAGGAGTGAACATTCTTGCAGCGTGGCTTGGCAATGACTCGAGCTCTACTCCACAAGGAACAAAGTCGCCACTCTTCAATATGATCTCAGGAACTTCAATGTCCTGCCCGCATGTCTCCGGCGTAGTGGCCTTCGTTAAATCTCAAAACCCCACATGGAGCCCCTCAGCAATCAACAATCTTTTGGAAAAAATAACAGCAATCCAAACTAATAACTTGGGTTCCCCGATGACTTTGGATACCGGATCGGTAGCCACACCTTATGATTATGGGGCAGGAGAAATATCAACCACTGGAGCATTACAACCAGGACTAGTCTATGAAACTAGTACAATAGACTACTTAAACTTCCTTTGCTATCGAGGTTATAACCTGTCCACCATTAAGAGCATCTCAAATACTGTTCCTGATGGTTTTGATTGCCCCAAGAAATCAACTGCAGACTACATATCCAACATGAACTACCCAACAATAGCAGTGTCCGCATTGACAGGCAAGGAAAGCAAGAAAATAAGCAGAACAGTTACAAATGTTGGTGGAGACGGTGAAACAATTTACACAGTTAGTGTGGACGCACCTGGGGAAGTAGATGTCAAAGTGGTTCCAGAGAAGTTGGAATTTACAAAGAACAATCAGAAGCAGAGTTACCAAGTGGAGTTCACCTCAAAAGTAGCCATACTAAAGAAAGAAGTCTTTGGATCAATAACTTGGACCAATGGAAAATATCGAGTCCGTAGTTCATTTGTCGTAACTAGTAAGAATAGTGATCTAGGAGATGACCTATAA 2337 46.9 MHSISFCFFVLVCAIFFLLSENGEIAAAAQGGNNGVYIVYMGSASGSRTDFLRLLNSVNRNRNAVVHTYKHGFTGFAARISEQEAEAMRHRPGVVSVFPDPLLKLHTTHSWDFLISQTSVKIDANPKSDPPSYSSQPYDTIIGILDTGIWPESESFNDKGMKPIPSRWKGTCMVGNDFTSSNCNKKIIGARFYESSESDGIQYHSPRDEAGHGTHVASTAAGSAVANASYYGLAAGTAKGGSPGSRIAMYRVCMADGCRGSAIMAAFDDAIADGVDCLSLSLGTPYYFKQGLKDDPIAIGAFHAVEKGIVVVCSAGNDGPTSGSVVNDAPWILTVAASTIDRVFESDVVMGNKKVIKGEGINFSALKKSPVYPLIQGKSAKKGDASEESARICSEDSMDEALVKGKIVICESNVEGGGSNWQGQAETVKSLGGIGVVLIDDQSKLIAEKFGTFPMTAIGSKDGAEVLSYVKSSGNPVATILPSVTIINYKPAPAIAYFSSRGPNPAVLNIMKPDISAPGVNILAAWLGNDSSSTPQGTKSPLFNMISGTSMSCPHVSGVVAFVKSQNPTWSPSAINNLLEKITAIQTNNLGSPMTLDTGSVATPYDYGAGEISTTGALQPGLVYETSTIDYLNFLCYRGYNLSTIKSISNTVPDGFDCPKKSTADYISNMNYPTIAVSALTGKESKKISRTVTNVGGDGETIYTVSVDAPGEVDVKVVPEKLEFTKNNQKQSYQVEFTSKVAILKKEVFGSITWTNGKYRVRSSFVVTSKNSDLGDDL 778
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 47238638 47242234 - Maker00007242 Lcy9g2281 643397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy9g2281 778 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 106 IPR037045 -
Lcy9g2281 778 Pfam PA domain 393 465 IPR003137 -
Lcy9g2281 778 Gene3D Peptidase S8/S53 domain 139 631 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lcy9g2281 778 SUPERFAMILY Protease propeptides/inhibitors 36 102 - -
Lcy9g2281 778 Gene3D - 635 770 - -
Lcy9g2281 778 ProSiteProfiles Serine proteases, subtilase domain profile. 110 618 - -
Lcy9g2281 778 ProSitePatterns Serine proteases, subtilase family, serine active site. 548 558 IPR023828 -
Lcy9g2281 778 PRINTS Subtilisin serine protease family (S8) signature 137 156 IPR015500 -
Lcy9g2281 778 PRINTS Subtilisin serine protease family (S8) signature 208 221 IPR015500 -
Lcy9g2281 778 PRINTS Subtilisin serine protease family (S8) signature 547 563 IPR015500 -
Lcy9g2281 778 ProSitePatterns Serine proteases, subtilase family, histidine active site. 212 222 IPR022398 -
Lcy9g2281 778 Pfam Fibronectin type-III domain 669 767 IPR041469 -
Lcy9g2281 778 Gene3D - 341 487 - -
Lcy9g2281 778 Pfam Subtilase family 140 583 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Lcy9g2281 778 CDD Peptidases_S8_3 103 575 IPR034197 -
Lcy9g2281 778 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 36 764 IPR045051 -
Lcy9g2281 778 SUPERFAMILY Subtilisin-like 136 619 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lcy9g2281 778 CDD PA_subtilisin_like 347 480 - -
Lcy9g2281 778 FunFam subtilisin-like protease SBT1.5 341 487 - -
Lcy9g2281 778 FunFam Subtilisin-like protease SBT1.5 139 352 - -
Lcy9g2281 778 Pfam Peptidase inhibitor I9 36 106 IPR010259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy8g1248 Lcy-Chr8:39042713 Lcy9g2281 Lcy-Chr9:47238638 9.37E-164 dispersed
Lcy8g2068 Lcy-Chr8:46889792 Lcy9g2281 Lcy-Chr9:47238638 4.58E-143 dispersed
Lcy9g0103 Lcy-Chr9:2228919 Lcy9g2281 Lcy-Chr9:47238638 4.03E-146 dispersed
Lcy9g0404 Lcy-Chr9:11378610 Lcy9g2281 Lcy-Chr9:47238638 1.21E-160 dispersed
Lcy9g2281 Lcy-Chr9:47238638 Lcy13g1622 Lcy-Chr13:35170538 1.78E-203 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy9g2281 K25898 - csv:101213415 1252.27