Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy9g2283 | ATGGCTCAAACGACGCCGAACCACACGCAGACGGTCTCCGGTTGGGCAGCTCATGATTCTTCCGGCAAGATCACTCCATTTACTTTCAAACGCAGAGAAAACGGCCCCGACGACGTGACCATAGAGATTTTGTACTGTGGAATATGCCACACCGATCTTCACTATGCCAAAAACGAGTGGGGCATCACCATGCATGAGATGACAGGGGTGATTTCGAAGGTGGGAAGCAACGTGAAGAAGTTCAAAGTAGGGGACAGAGTGGGAGTTGGCTGTATAGCCGCTTCGTGCTTGAACTGTGAGTTCTGCCAAGATTGCCAAGAGAATTACTGCGAAAGTTTGCAGTTCACATACAACGGAATCTTCTGGGATGGGAGCATAACTTACGGCGGATACTCCAAAATGTTTGTTTCAGATCAGAGGTACGTTGTGCACATACCGGAGAGCCTGCCGATGGACGCGGCGGCGCCGCTGCTGTGCGCTGGGATTACAGTGTTCACGCCGATGAAAGACCTTGATCTGATCGACTCGCCGAGGAAGAAGGTGGGAGTGGTGGGGCTTGGAGGGCTTGGCCACATAGCAGTCAAATTTGCAAAGGCGTTTGGCCACCATGTGACTGTGATCAGCACCTCTGCTTCAAAGGAACGAGAGGCCAAAGAGCGCCTTGGCGCTGACGAGTTCATAGTCAGTAAAGATCCTCAGCAAATGCAGGATAATAGGAGGACGTTGGATTTTATATTGGACACAGTTTCGGCACAGCATTGCGTTGGCGCAATCTTGGAATTGCTGAAAGTAAATGGGACATTGTCCATTGTGGGAGCTCCAGACAAGCCCATCCAATTGCCGTCCTTCCCTCTAATATTTGGGAAAAGGACGGTGAAGGGAAGCATAATAGGTGGAATACAAGAGACTCAAGAGATGATGGACTTGTGTGGAAAGTACAACATTACTAGTGATATTGAGGTTATTAAGCCTGACAACATCAACCATGCTATGGAACGTCTCACCAACAACGATGTACGATACCGATTTGTCATCGACATTGCCCAACAAAAAGCTAAATATTAA | 1065 | 48.73 | MAQTTPNHTQTVSGWAAHDSSGKITPFTFKRRENGPDDVTIEILYCGICHTDLHYAKNEWGITMHEMTGVISKVGSNVKKFKVGDRVGVGCIAASCLNCEFCQDCQENYCESLQFTYNGIFWDGSITYGGYSKMFVSDQRYVVHIPESLPMDAAAPLLCAGITVFTPMKDLDLIDSPRKKVGVVGLGGLGHIAVKFAKAFGHHVTVISTSASKEREAKERLGADEFIVSKDPQQMQDNRRTLDFILDTVSAQHCVGAILELLKVNGTLSIVGAPDKPIQLPSFPLIFGKRTVKGSIIGGIQETQEMMDLCGKYNITSDIEVIKPDNINHAMERLTNNDVRYRFVIDIAQQKAKY | 354 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 47268657 | 47271591 | + | Maker00007151 | Lcy9g2283 | 643399 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy9g2283 | 354 | FunFam | Cinnamyl alcohol dehydrogenase | 160 | 317 | - | - | |
Lcy9g2283 | 354 | Pfam | Zinc-binding dehydrogenase | 188 | 310 | IPR013149 | - | |
Lcy9g2283 | 354 | Gene3D | - | 160 | 317 | - | - | |
Lcy9g2283 | 354 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 149 | 315 | IPR036291 | - | |
Lcy9g2283 | 354 | PANTHER | ALDEHYDE REDUCTASE | 7 | 349 | IPR047109 | GO:0009809(PANTHER)|GO:0016616(PANTHER)|GO:0016616(InterPro)|GO:0045551(PANTHER) | |
Lcy9g2283 | 354 | SUPERFAMILY | GroES-like | 7 | 193 | IPR011032 | - | |
Lcy9g2283 | 354 | Gene3D | - | 15 | 347 | - | - | |
Lcy9g2283 | 354 | CDD | CAD1 | 14 | 346 | IPR047109 | GO:0016616(InterPro) | |
Lcy9g2283 | 354 | Pfam | Alcohol dehydrogenase GroES-like domain | 35 | 147 | IPR013154 | - | |
Lcy9g2283 | 354 | SMART | PKS_ER_names_mod | 19 | 345 | IPR020843 | GO:0016491(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy8g0232 | Lcy-Chr8:6158046 | Lcy9g2283 | Lcy-Chr9:47268657 | 3.07E-112 | dispersed | |
Lcy9g2283 | Lcy-Chr9:47268657 | Lcy8g0233 | Lcy-Chr8:6209097 | 4.30E-140 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy9g2283 | K00083 | - | csv:101213170 | 649.818 |