Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy9g2319 | ATGGCTGGATCGGATGAGAACAACCCGGGAGTGATCGGACGGCCAAATCTCCATGGGAGTTTACGAGTTGGTGGTGGCGGTGGTGGCAAATTTGTAGTGGGGGTGGGTCAAAATCGCAGAGCTTTGAGCAGCATTAATGGCAATGTTACGGCAGCTCCTCCCCCTCATCCCTGTGCAGTCCTCAAAAAAGGCCTAACAGAAACTGATGTTGCTCTCAACAATAAAGACCCTCCGATTCCGATTCATCGACCGATCACTCGGAAGTTTGCTGCTCAGCTGGCTAATAAGCATCAGCAACCTGTACCTGAGGTTGATAGAAAGCCACTACAATCTGTCCCAACTCGAAAAGAATCTTTAGATCATCATACCATCATAGAGGAAGATGATTCTATGGGAGATTCAGCAGTACCAATGTTTGTACAGCATACAGAAGCAATGTTGGACGAAATTGACAGAATGGAGGAAGTGGAAATGGAAGATATAGAAGAAGAGCCAGTAATTGACATAGACTGCAGCGATAAGAAGGATCAACTAGCTGTTGTGGAGTACATTGACGACTTGTACGCTTACTACAGGAAAGCTGAGGTTTCTGGCTGTGTCCCACCGAACTACATGGCTCAGCAAGCAGATATTAACGAGAGGATGAGAGGGATTCTCATTGACTGGCTAATTGAGGTACACTACAAGTTTGAGCTGATGGAGGAGACATTGTATCTAACAGTCAACCTGATCGATAGGTTCTTGGCGGTTCAGTCAGTGGTGAGGAAGAAGCTCCAGCTTGTTGGGGTAACGGCCATGCTTATTGCCTGCAAGTATGAAGAAGTTTCTGTGCCTGTTGTGGATGATCTTATTCTCATATCTGACAAGGCCTACAGCCGGAAAGAAGTTTTGGACATGGAGAAGTTGATGATAAACACCTTACAGTTCAATCTGTCTGTGCCAACACCTTATGTCTTCATAAGGAGGTTTCTCAAAGCTGCTCAATCTGATCGAGAGCTGGATCTGCTGTCATTCTTCATGGTGGAGCTCTGTTTAGTGGAATATGAAATGCTGAAGTATAGACCTTCATTAATGGCTGCTGCTGCAGTCTTCACTGCTCAATGTACCATCAATGGCTTCAAAGAATGGAGCAAAACCAGTGAATGGCACACTGGATATTCACAGGAACAGCTTCTGGAATGTTCACGTTTGATGGTGGGGTTCCATCAGAAAGCAGGGACAGGGAAATTGACAGGAGTTCACAGGAAGTATTGCACATCCAAGTTTGGATATGCTGCAAGAAGTGAACCAGCAAACTTTCTGCTGGAAGGAAGGCTATAG | 1320 | 45.61 | MAGSDENNPGVIGRPNLHGSLRVGGGGGGKFVVGVGQNRRALSSINGNVTAAPPPHPCAVLKKGLTETDVALNNKDPPIPIHRPITRKFAAQLANKHQQPVPEVDRKPLQSVPTRKESLDHHTIIEEDDSMGDSAVPMFVQHTEAMLDEIDRMEEVEMEDIEEEPVIDIDCSDKKDQLAVVEYIDDLYAYYRKAEVSGCVPPNYMAQQADINERMRGILIDWLIEVHYKFELMEETLYLTVNLIDRFLAVQSVVRKKLQLVGVTAMLIACKYEEVSVPVVDDLILISDKAYSRKEVLDMEKLMINTLQFNLSVPTPYVFIRRFLKAAQSDRELDLLSFFMVELCLVEYEMLKYRPSLMAAAAVFTAQCTINGFKEWSKTSEWHTGYSQEQLLECSRLMVGFHQKAGTGKLTGVHRKYCTSKFGYAARSEPANFLLEGRL | 439 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 47549657 | 47553050 | - | Maker00007220 | Lcy9g2319 | 643435 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy9g2319 | 439 | SUPERFAMILY | Cyclin-like | 313 | 432 | IPR036915 | - | |
Lcy9g2319 | 439 | Gene3D | - | 186 | 425 | - | - | |
Lcy9g2319 | 439 | PANTHER | CYCLINS | 159 | 418 | IPR039361 | GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER) | |
Lcy9g2319 | 439 | CDD | CYCLIN_AtCycB-like_rpt1 | 165 | 309 | - | - | |
Lcy9g2319 | 439 | SMART | cyclin_7 | 318 | 400 | IPR013763 | - | |
Lcy9g2319 | 439 | SMART | cyclin_7 | 221 | 305 | IPR013763 | - | |
Lcy9g2319 | 439 | Pfam | Cyclin, N-terminal domain | 186 | 312 | IPR006671 | - | |
Lcy9g2319 | 439 | SMART | Cyclin_C_2 | 314 | 431 | IPR004367 | - | |
Lcy9g2319 | 439 | FunFam | G2/mitotic-specific cyclin-1 | 301 | 426 | - | - | |
Lcy9g2319 | 439 | ProSitePatterns | Cyclins signature. | 216 | 247 | IPR048258 | - | |
Lcy9g2319 | 439 | Gene3D | - | 200 | 312 | - | - | |
Lcy9g2319 | 439 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Lcy9g2319 | 439 | CDD | CYCLIN_AtCycB-like_rpt2 | 314 | 430 | - | - | |
Lcy9g2319 | 439 | Pfam | Cyclin, C-terminal domain | 314 | 430 | IPR004367 | - | |
Lcy9g2319 | 439 | SUPERFAMILY | Cyclin-like | 176 | 311 | IPR036915 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy4g0046 | Lcy-Chr4:762718 | Lcy9g2319 | Lcy-Chr9:47549657 | 3.15E-55 | dispersed | |
Lcy4g0049 | Lcy-Chr4:803851 | Lcy9g2319 | Lcy-Chr9:47549657 | 3.15E-55 | dispersed | |
Lcy9g2059 | Lcy-Chr9:45380665 | Lcy9g2319 | Lcy-Chr9:47549657 | 5.18E-49 | dispersed | |
Lcy1g1775 | Lcy-Chr1:18946357 | Lcy9g2319 | Lcy-Chr9:47549657 | 2.40E-83 | transposed | |
Lcy8g2036 | Lcy-Chr8:46611979 | Lcy9g2319 | Lcy-Chr9:47549657 | 3.98E-70 | transposed | |
Lcy1g0554 | Lcy-Chr1:4776623 | Lcy9g2319 | Lcy-Chr9:47549657 | 2.49E-167 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy9g2319 | K21777 | - | csv:101223199 | 780.015 |