Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy9g2361 ATGGCGACGGTGGCGATGAAGGGTAAAGTCTGTGTGACAGGGGCTGGAGGGTTCATTGGTTCGTGGGTCGTCAAGCTTCTGCTATCCAGGGATTATATTGTCCATGGAACTGTCAGGGAACCAAGTGATGCCAAGTATGATCACTTGAGAAAACTTGAGAAAGGGGCCGAGAATCTGGTACTGTTTAAGGCTGACTTACTGGACTATGAGTCTCTGCGTCCTGCATTTGCAGGGTGTGATGGAGTTTTCCATGTTGCCAGTCCAGTTCCTTCCACAACTTCATCAAATCCAGAGACAGAAGTGCTTGAACCTGCTGTAAAGGGCACTCTTAATGTGCTTGAAGCATGTGTTGAAGCAAAAGTTAAGCGAGTAGTTGTAGTGTCCTCTGCTGCTGCAGTGTTTTTCAATCCAAGTTGGCCTCAAGGTCAAGTAATGGATGAAAGTTGTTGGTCCGATAAGGAGTACTGCAGAGCTACTAAGAACTGGTATTTTCTGTCAAAAACAGAAGCTGAGAGTGAAGCCTTGGAGTTTGGGAAAAGACGTGGGCTTGACGTGGTCACTATTTGTCCTACCCTCGTTACCGGGCCAATTTTGCAGCCAACAGTCAACTCTAGCAGCTTGGTTCTTCATAGAATTCTAAAAGGAGGATACGAATCGGTGGAGAACAGGGTACACCTGTTAGTAGATGTGCGAGATGTAGCGGAGGGGTTAATTCTTTTATATGAGAAGGGCGAGGCAGAAGGAAGGTACATTTGTACAGCGCATGTGATGGAGACAGGGGAGCTGGTGGACATGTTGAAGAGGAAGTACCCTGATTATAATTATCCAAAGAAGGTGAGTGAAGGGAACAAGGAGTCGAAAAGTTTGAGCTCGGAGAAGCTGCAAACATTGGGTTGGAATTATCGGGCTATAGAAGAGACGCTTGCGGATGCTGTCCAGAGTTTCAAAGACGCGGCCTTGTTGGACTGA 969 46.96 MATVAMKGKVCVTGAGGFIGSWVVKLLLSRDYIVHGTVREPSDAKYDHLRKLEKGAENLVLFKADLLDYESLRPAFAGCDGVFHVASPVPSTTSSNPETEVLEPAVKGTLNVLEACVEAKVKRVVVVSSAAAVFFNPSWPQGQVMDESCWSDKEYCRATKNWYFLSKTEAESEALEFGKRRGLDVVTICPTLVTGPILQPTVNSSSLVLHRILKGGYESVENRVHLLVDVRDVAEGLILLYEKGEAEGRYICTAHVMETGELVDMLKRKYPDYNYPKKVSEGNKESKSLSSEKLQTLGWNYRAIEETLADAVQSFKDAALLD 322
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 47874468 47879056 + Maker00007167 Lcy9g2361 643477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy9g2361 322 FunFam NAD(P)-binding Rossmann-fold superfamily protein 3 322 - -
Lcy9g2361 322 Pfam NAD dependent epimerase/dehydratase family 10 246 IPR001509 -
Lcy9g2361 322 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 9 314 IPR050425 GO:0016616(PANTHER)
Lcy9g2361 322 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 316 IPR036291 -
Lcy9g2361 322 Gene3D - 3 322 - -
Lcy9g2361 322 CDD FR_SDR_e 10 299 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy8g2086 Lcy-Chr8:47054401 Lcy9g2361 Lcy-Chr9:47874468 1.89E-68 dispersed
Lcy9g2361 Lcy-Chr9:47874468 Lcy3g1996 Lcy-Chr3:47089779 7.22E-95 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy9g2361 - - - 0.0