Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy9g2374 | ATGTTAAACTTTGAAATACTGCATGCTCGTTGGGCTATGTTAGCATCCCTGGGTGCTTTAATTCCAGAGATCTTAGATATTTTTGGAGCTTTTCATTTCACTGAACCCATCTGGTGGCGAGTGGGCTATTCAAAACTTAAGGGAGATACACTCGACTATCTTGGAATACCAGGGCTTCATTTAGCTGGAAGCCAAGGAGTGATTGTCATTGCAATTTGCCAAGCCATTTTGATGGTTGGACCCGAGTATGCAAGATATTGTGGCATAGAGGCATTGGAGCCTCTGGGAATATATCTGCCGGGGGATATAAATTATCCTGGTGGTGTGTTGTTTGACCCCTTGAACCTGTCCAAGGATGCTGCAGCTTTTGAGGAACTTAAGGTAAAAGAGATTAAAAATGGGCGGTTAGCCATGGTTGCCTGGCTTGGATTTTACAGTCAAGCAGCATTGACGGGTAAGGGACCAGTCCAAAACCTTCTCGAACACATTTCAGATCCTTTCCACAAAAACATTCTTTCCCTGCTCAACTCTTCAAATTCAAAGGAATTAAGAAACCGAAGGCATAGGCCACAATGCATAATTGAGGGTGCTGGTGAACCTGATGTGAGCCTAGTAAAGCTTCTAAGTCAACTGGCGTATACGGATTGGATCCAGCCAGAGCCAATTGGGATGGGACCTCGATCTGCATGCGAGGCAACACACGCTTCAACGTGGTCCTCTGCATCTTCATCTTGTTTATTCTATTCCACCATCGACCCGGTTAGGCTTGACAATAAGAACCAGTTGTGA | 789 | 44.99 | MLNFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHKNILSLLNSSNSKELRNRRHRPQCIIEGAGEPDVSLVKLLSQLAYTDWIQPEPIGMGPRSACEATHASTWSSASSSCLFYSTIDPVRLDNKNQL | 262 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 48038279 | 48043488 | + | Maker00007024 | Lcy9g2374 | 643490 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy9g2374 | 262 | FunFam | Chlorophyll a-b binding protein, chloroplastic | 1 | 175 | - | - | |
Lcy9g2374 | 262 | SUPERFAMILY | Chlorophyll a-b binding protein | 4 | 177 | - | - | |
Lcy9g2374 | 262 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 3 | 174 | IPR001344 | GO:0009416(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0016020(InterPro) | |
Lcy9g2374 | 262 | Pfam | Chlorophyll A-B binding protein | 4 | 148 | IPR022796 | - | |
Lcy9g2374 | 262 | Gene3D | Chlorophyll a/b binding protein domain | 1 | 175 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy5g2537 | Lcy-Chr5:48148995 | Lcy9g2374 | Lcy-Chr9:48038279 | 3.37E-24 | dispersed | |
Lcy7g0042 | Lcy-Chr7:331102 | Lcy9g2374 | Lcy-Chr9:48038279 | 1.17E-18 | dispersed | |
Lcy9g2374 | Lcy-Chr9:48038279 | Lcy8g1625 | Lcy-Chr8:42832368 | 5.83E-38 | dispersed | |
Lcy9g2374 | Lcy-Chr9:48038279 | Lcy6g1248 | Lcy-Chr6:15037695 | 6.22E-41 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy9g2374 | K14172 | - | csv:101209460 | 348.591 |