Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi01g00525 ATGTTGCTGGTTTATTATTTGTGTTTGAGTTTGTTGTGGGGGAAGTCGTGGGGGGCTTCAGCCGGCGGTGATGGCACCACGAGGGAGCTCGATCAGACTCCGACGTGGGCTGTTGCTGGTGTTTGTGCTATTATCATCGTTATTTCTATCGCCTTGGAGAAACTCCTTCATAAAGCTGGAACGTGGCTTACGGAAAAGCACAAGAGAGCTCTTTTTGAAGCTCTGGAGAAAGTTAAAGCTGCAGTCAAAGGGGACAAATTGGAAAAGAACTTTGAAGGAGCCGATGAAGGCGAACATCATCGACGACTTCTATGGTATGAACGCAGGTTCCTGGCTGCTGCTGGTGGTGCTGTTAGTTGCAAGGAAGGTCATGTACCGCTTATATCTATCTCGGGATTGCATCAGTTGCACTTATTTATCTTCTTCTTAGCCGTATTTCATGTCGTATATAGTGCTATCACAATGATGCTTGGGAGGCTAAAGATTCGAGGTTGGAAGGCGTGGGAGGAGGAGACCTCAACTCACAATTATGAGTTCTCCAATGATAATGCACGATTCAGGCTTACTCATGAAACATCATTTGTGAAAGCCCACACAAGTTTTTGGACAAAACTTCCTGTCTTCTTTTATATTGGATGCTTCTTCCGACAATTTTTCCGGTCCGTTGGTAAGGCTGACTACTTGGCATTACGTAATGGATTCATCGCTGTTCATCTTGCTCCAGGAAGTAAATTTGACTTTCAAAAATATATTAAAAGGTCTCTAGAAGATGACTTCAAAATAATTGTGGGAGTGAGTCCCGTGCTTTGGGCATCGTTTGTCGTCTTCTTGCTCATAAATGTTTATGGATGGCAAGCATTGTTTTGGACATCCTTAGTCCCTGTGATTATAATCCTGGCTGTTGGAACAAAGCTTCAAGGAATTATGACAAAAATGGCTCTTGAGATTACAGAAAGACATGCTGTTGTTCAAGGAATTCCTCTTGTTCAGGCATCAGATAAATATTTTTGGTTTGGCAAGCCTCAGCTGGTTCTTTACCTCATCCACTTCGCTTTATTTTCGTATTCCTTTGGGCTAAAATCCTGCTTCCATACTGATTTCAAGCTTGCAATCGTAAAAGTTGGTCTCGGGGTTGGCGTTCTCTGTCTTTGCAGTTATATAACTCTTCCACTCTATGCTCTTGTGACTCAGTATAATTTTGCTGGTCTTGCGGGGCTGACTCGGTCGGTGGCTTTGCAGATGGGTACACGTATGAAGAAGTCGATCTTTGACGAACAAACATCAAAGGCCCTCAAGAAGTGGCACATGGCTGTTAAGAAGCGGCATGGAAAGTCCCCAACACGAAAGCTAGGGAGTCCAAATGCGTCGCCAATACATTCATCATCTGGCTACACATTGCATCGTTTCAAAACCACAGGTCACTCAAACAGATCATCCATGTACGATGAGAATGATGCATCTGATTATGAAGTTGATCCGTTGTCGCCTAAAGTCGATACTCCAAATTTTACGGTTAGAATAGATCGCACGGATGAACATCAAGCCGAAATAATTGAATCCCAGCATACAGAAAAAAGGAATGAAGACGATTTCTCATTTGCCAAGCCTGGACCAACGAAAGGACCATGA 1629 43.52 MLLVYYLCLSLLWGKSWGASAGGDGTTRELDQTPTWAVAGVCAIIIVISIALEKLLHKAGTWLTEKHKRALFEALEKVKAAVKGDKLEKNFEGADEGEHHRRLLWYERRFLAAAGGAVSCKEGHVPLISISGLHQLHLFIFFLAVFHVVYSAITMMLGRLKIRGWKAWEEETSTHNYEFSNDNARFRLTHETSFVKAHTSFWTKLPVFFYIGCFFRQFFRSVGKADYLALRNGFIAVHLAPGSKFDFQKYIKRSLEDDFKIIVGVSPVLWASFVVFLLINVYGWQALFWTSLVPVIIILAVGTKLQGIMTKMALEITERHAVVQGIPLVQASDKYFWFGKPQLVLYLIHFALFSYSFGLKSCFHTDFKLAIVKVGLGVGVLCLCSYITLPLYALVTQYNFAGLAGLTRSVALQMGTRMKKSIFDEQTSKALKKWHMAVKKRHGKSPTRKLGSPNASPIHSSSGYTLHRFKTTGHSNRSSMYDENDASDYEVDPLSPKVDTPNFTVRIDRTDEHQAEIIESQHTEKRNEDDFSFAKPGPTKGP 542
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4298311 4303598 - Lsi01G005250.1 Lsi01g00525 653183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi01g00525 542 MobiDBLite consensus disorder prediction 438 542 - -
Lsi01g00525 542 PANTHER MLO-LIKE PROTEIN 1 20 81 IPR004326 GO:0006952|GO:0016021
Lsi01g00525 542 PANTHER MLO-LIKE PROTEIN 1 94 531 IPR004326 GO:0006952|GO:0016021
Lsi01g00525 542 MobiDBLite consensus disorder prediction 504 533 - -
Lsi01g00525 542 Pfam Mlo family 28 80 IPR004326 GO:0006952|GO:0016021
Lsi01g00525 542 Pfam Mlo family 98 456 IPR004326 GO:0006952|GO:0016021
Lsi01g00525 542 MobiDBLite consensus disorder prediction 449 482 - -
Lsi01g00525 542 PANTHER MLO-LIKE PROTEIN 20 81 - -
Lsi01g00525 542 PANTHER MLO-LIKE PROTEIN 94 531 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi01g00525 Lsi-Chr1:4298311 Lsi07g01039 Lsi-Chr7:15744283 3.60E-162 dispersed
Lsi01g00525 Lsi-Chr1:4298311 Lsi08g00776 Lsi-Chr8:16142106 2.18E-150 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi01g00525 K08472 - csv:101212923 927.161