Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi01g00622 ATGGATTCTCAATCTCTTCTTCAACCTCTCATCATGGCATTCTTTTTCACAGTCCCTCTTCTGTTTCTGCTCCGACGTTTCCGGCGAAAACTGCCGTTTCCACCCGGCCCAAAAGGCCTTCCCTTCATCGGCAACATGCTGATGATGGACCAGCTCACCCACCGTGGGCTCGCCAATCTCGCCACCCGCTACGGCGGAATCTTCCATATGCGGATGGGCTTCCTTCACATGGTCACTGTCTCCAACCCCGACATCGCCCGCCAAGTTCTTCAGGTCCATGATGGTATTTGTTCTAACCGTCCGGCCACCATCGCAATAGCCTACTTAACGTACAACCGCTCCGACATGGCTTTCGCTCACTACGGCCCATTTTGGCGACAAATGCGTAAGCTTTGCGTCATGAAATTGTTTAGCCGGAAGCGAGCTGAGTCGTGGCAGTCCGTTCGAGATGAGGTGGACACCACCATTAGAAAGGTCGCCGTCCAGACGGGAACCGCCGTAAACGTCGGGGAGCTAGTGTTTGAACTGACGAGAGATATTATTTATAGAGCCGCGTTTGGGACGAGCGCGATGCAAGGGCAAGATGAGTTTATAAGTATCTTACAAGAATTCTCTAAACTTTTCGGAGCTTTCAATATCGCCGATTTTATCTCGAGTCTCGGTTGGATTGACCCTCAAGGCTTGAACAACAGGCTTGTGAAGGCTCGTCAATCACTCGATAAATTCATCGACTCCATAATCGACGATCACATAAATAAAAAAAAGAAGGAATCAAAATTACCAAATTATGACCATGAAATTGACAACGATATGGTGGATGAATTATTGGCTTTCTATAGTGAAGACTCGACGGTAACAAATGCATCGGATGATCTACAAAACAACATCAAATTCAACCGTGACAACATCAAAGCCATCATCATGGCAACTCTTTCATGA 939 47.5 MDSQSLLQPLIMAFFFTVPLLFLLRRFRRKLPFPPGPKGLPFIGNMLMMDQLTHRGLANLATRYGGIFHMRMGFLHMVTVSNPDIARQVLQVHDGICSNRPATIAIAYLTYNRSDMAFAHYGPFWRQMRKLCVMKLFSRKRAESWQSVRDEVDTTIRKVAVQTGTAVNVGELVFELTRDIIYRAAFGTSAMQGQDEFISILQEFSKLFGAFNIADFISSLGWIDPQGLNNRLVKARQSLDKFIDSIIDDHINKKKKESKLPNYDHEIDNDMVDELLAFYSEDSTVTNASDDLQNNIKFNRDNIKAIIMATLS 312
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 5002931 5004585 - Lsi01G006220.1 Lsi01g00622 653280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi01g00622 312 SUPERFAMILY Cytochrome P450 25 309 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi01g00622 312 PANTHER CYTOCHROME P450 FAMILY 1 6 306 - -
Lsi01g00622 312 Pfam Cytochrome P450 34 307 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi01g00622 312 Gene3D Cytochrome P450 22 312 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi01g00622 312 PANTHER OS04G0539300 PROTEIN 6 306 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi01g00622 Lsi-Chr1:5002931 Lsi11g01133 Lsi-Chr11:19797173 2.96E-116 dispersed
Lsi01g00622 Lsi-Chr1:5002931 Lsi07g00225 Lsi-Chr7:2443353 7.81E-128 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi01g00622 K09755 - csv:101205783 473.396