Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi01g00703 ATGCCTGTGGAAGAATCCAAAACCCACGTGGCTTTGCTGGTCAGCCCCGGAATGGGACATCTCATTCCCTTCCTCGAGCTGGCCAACCGCCTCGTCCTCCATCACAACCTCCAAGCTACCCTCTTTGTCGTCGGCACCGGCTCCTCCGCCGCCGAATCCACCCTTCTCCAAAAACCTTCCGCCGTAAACATCGTCTCACTTCCTCACTCCTCATCCACCCTCGACCCAAATGCCTCCTACATCGACATAATCAAGGCCATGATGACCGCTTCTTTCCCCCACCTCCGCTCCTCCATCGCCGCTGCCAAGCCCCGTCCGGCGGCGTTGATCGTTGACCTTTTCGGAACCGAAGCTATATCCATAGCTCACGAACTCGGCATGTTGGGATTCGTTTTCATAACCTCCAACGCCTGGTTCCTCTCTCTCTCATTCTTTTTCCCTTCCATGGACAGACCAACCATTGACGCCCACGTGTACAACCACGAAGCCCTCAAAATCCCGGGTTGCACTCCGGTCCGATTCGAAGATACCACCGAGGTGTTCCAATTGAACCAGGAGGATGTTTACGAGGGATTCGGAAGTTTCGCACGGGAACTTGGAACGGCCGATGGGATCTTATCGAATACGTGGCAGGATCTGGAGCCCACAACACTAAAAGCACTGACTGAAGCTGGGACCCTCAGTAAAGGAAAAGTCAACCAAGTCCCGATCAATCCAATTGGGCCGTTGACTAGACATGCTGAGCCCAATTTGGAGAGTGAGGTGCTGAAATGGCTCGACCAGCAACCGGATGAGTCGGTGATCTACGTGTCGTTTGGGAGTGGGGGGACGTTGTGTGCAGAGCAAATCACGGAATTGGCGTGGGGGTTGGAGCTGAGTCAGCAAAGGTTTGTTTGGGTGATACGGCCGCCGGCAGGGACCGATTCTGTGGGAGCATTTTTCACGGCGGGAACCGGATCTGCAGACGAGTCGCCGCCTGAATACCTGCCGGAAGGGTTCATAAAAAGGACGAAAGAGGTGGGTTTAGTAGTTCCGATGTGGGGACCACAGGCGGAGATTTTGAGCCATAGATCGGTGAGGGGATTTATTACGCACTGTGGATGGAACTCGTCGTTAGAGGGCATAGTGAACGGAGTGGCGATGGTGACGTGGCCATTGTACGCTGAGCAGAAGATGAACGCGACGTTGCTAACGGAGGAGGTGGGGGTGGCGGTGAGGGTCAGGACGGAGAGGGTGGTGGGGAGGGAAGAGATAGAGAGAAAGGTGAGGAAGATAATGGAGGATGAAGAAGGTCGGGAAATCAGAGAGAGAGTTAAAGGGCTTAAAATTAGTGGTGAAAAGGCCATTTCTAAGGGTGGGTCCTCCTACAACTCTTTGGCTCATATGGCTTCAGAATGCGATATTTTCCGGCGCCGGAGAGACGGAGGGTGTTAG 1434 54.25 MPVEESKTHVALLVSPGMGHLIPFLELANRLVLHHNLQATLFVVGTGSSAAESTLLQKPSAVNIVSLPHSSSTLDPNASYIDIIKAMMTASFPHLRSSIAAAKPRPAALIVDLFGTEAISIAHELGMLGFVFITSNAWFLSLSFFFPSMDRPTIDAHVYNHEALKIPGCTPVRFEDTTEVFQLNQEDVYEGFGSFARELGTADGILSNTWQDLEPTTLKALTEAGTLSKGKVNQVPINPIGPLTRHAEPNLESEVLKWLDQQPDESVIYVSFGSGGTLCAEQITELAWGLELSQQRFVWVIRPPAGTDSVGAFFTAGTGSADESPPEYLPEGFIKRTKEVGLVVPMWGPQAEILSHRSVRGFITHCGWNSSLEGIVNGVAMVTWPLYAEQKMNATLLTEEVGVAVRVRTERVVGREEIERKVRKIMEDEEGREIRERVKGLKISGEKAISKGGSSYNSLAHMASECDIFRRRRDGGC 477
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 5614144 5615577 - Lsi01G007030.1 Lsi01g00703 653361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi01g00703 477 PANTHER UDP-GLYCOSYLTRANSFERASE 72E1 4 468 - -
Lsi01g00703 477 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 462 - -
Lsi01g00703 477 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 240 430 IPR002213 GO:0008194
Lsi01g00703 477 CDD GT1_Gtf-like 9 442 IPR002213 GO:0008194
Lsi01g00703 477 Gene3D Glycogen Phosphorylase B; 253 450 - -
Lsi01g00703 477 Gene3D Glycogen Phosphorylase B; 9 455 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Lsi01g00703 Lsi07g00267 CCT
Lsi01g00703 Lsi07g00267 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi01g00703 Lsi-Chr1:5614144 Lsi07g00193 Lsi-Chr7:2103751 1.55E-141 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi01g00703 K12356 - csv:101215927 729.169