Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi01g00896 ATGGTCTACGCTAAACAAATCAAGCAATTCTTGCAAGGCGCATTCACAATCGTTATCGTGTTGTTTGAGAAAAAGCAAAGTAGTGGCGATTCCTTGTGTGGATTCCATTTTCAAGTGACAGCTGAGCCTCTCTCACGCACCCTGCCTTTGCTTTCCACATCCTCTTTCTGTCTTGCCACTGCCATATCAGAGCAGAATTACAGGTGGATGCACACCCATTGTTTACGAAACTACCTCCGCCACCTCCTCCGACTGACCTCTTTCAACGCTCTTTTCAATTTCAATCTTGTTCTTGAGCGAGGCTTTAGGAGGAGTTGCGAATCTCTCTTTGAAACTACTATTCGGTGTTTCCTGATTCATTTTTCTGTTTTTTTTGTTGATCTTTGGCATGCTGCTTCGTTGTTCAGTTCCGAGATGGTCACGTTGCAATCGGTGCGACCGCTGGTTCGCATGTATGAATATCGGCCGTTGATATCCCCATCTTTGGGGAGGTTGAAGCCGGCGAACGTTGCAGTGAACAATGCGATTGGACTGGAGCGGAGTTGTGGAGCTTGGGGGTTTTGTTGCGATGCTGTTGCTACTAGTTTCTTACGGCCATTTAAAGCGGCGAAGAGCAATTGCTCTGCGATTCACGGTACTTATGTTGGAAAATCGCGTTGTATTCTTTTTATTCAGACTGTTGCATCGAAGAATTTGTGCCCTAGAAGAAAGGTAAATCACAAAATCACGAGTTTGGTCATGGTTCCGAACGCATTGAAAATAGCTCTAGCTTATCGTAAAGGTTGCCATGAGACCTCAACTGGTGGGAAGTCAACAAATATCGTATGGCATGATTGTCCTATTGGGAAGCCTCAAAGAGAAAAGTTGATTCAGCAGAAAGGCTGTGTCATATGGATAACTGGTCTGAGTGGTTCAGAAGCCTGTAAGACTTACTTCACTGACCAGATTTGCAGGACCGATCACCCGTCTCTTTATGATTGCCCATCTGCAATTTGGATTGATATTATCCTTTTGATGCACAGAGTCTACAATTACTCTCTCTCTCTTTCTCTCTCTCACACACCTAGGGCTCTAATTATAGGAAAAAGCACTTTGGCATGTGCATTAAGTCAAGGCTTACATTCAAGAAGAAAACTGACCTACATCCTTGATGGTGACAATATTAGGCATGGTCTAAACAGTGATCTTAGTTTTGCACCCGAAGATCGTGCAGAAAACATACGGAGAATTGGTGGGTGTCCTTTTCTATCTGATGAAAAATTTTCATTGACACGATCTATAGGTGAGGTAGCAAGCCTCTTTGCAGATGCTGGGATTATTTGTATTGCTAGTTTAATATCTCCTTTTCGGAAGGATAGAGATGCCTGTCGTGCCTTGCTGGCAGAAGGTGATTTTATTGAGGTTTTCCTTGATGTACCACTTAATGTATGTGAAGCCCGGGATCCAAAGGGTCTGTATAAACTGTCTAGAGCAGGAAAGATACAAGGATTCACAGGGATAGATGATCCATATGAAGAACCATTAAATTCTGAGATCGTGTTGCAATACAAAGAAGGGATATGCTCGTCCCCTATTGACATGGCGGAAAGAGTGATTTCATATTTAGAAGAGAGAGGGAGGAAACGAAATTACTCCTCTTATTTCTCACTGCTAGGAAACATCTCGTTTCCTTCAGTCTCTGCTTTCCAATTCTTGGGTCATTTAGCATTCTTCTTACGAATAAGAACTATAGTAACGACATGTCGACAAAAGGTCAGCTTCGGTAACCTCGTCTGGATTTTGAGTTGGTGTGGAAGGAGGAGCCCTAATTGCAGAGATTCGCCAGCTTCCGAGTTCGAAGCTCAAAGGGGCAAAGGAAGATGGGGAAGAAACAGCACAGTAAAGACCGTCTGTTTATTACGAAAACTGAATGGGCCACCGAATGGGGTGGCGCCAAACCCAAGGACTCTCAAACCCCTTTCAAACGGCTTCCTTTCTATTGCTGCGCAATTGTTACTTCATTTTAATGGCAGGCTTACATTTACACCCTTCGAGTACCCTGTATGTACCGCCGATGGCAGCGTGTTCGAGATAATGAATATCATCCCTTATATTCGAAAATATGGTAAAAATCCTGTTACTGGAGCTTCCCTGAAGCAGGAGGAACTAATTCCGTTGATATTCCACAAGAATTCTGAAGGCGAGTTCCAATGTCCTGTACTAAACAAAGTTTTTACCGAGTTCACTCACATAGTTGCTATAAAGACCACTGGAAATGTCTTCTGCTATGAGGCAGTTAAAGAATTAAATATCAAGACAAAAAACTGGAAGGAACTTCTCACTGATGAACCATTTAGTAGGGGAGATATTATAACCATTCAGAACCCTACTGCGCTTGATAGTAAAGTTCTCCTGGATTTTGATCATGTGAAAAATAGCCTGAAAGTTGATGATGAAGAACTTCAAAAAATGAAATCAGATCCAACATATAACATAAATGTGTCGGGGGACATCAAGCAGATGCTGCAGGAACTTGGAACCGAAAAAGGAAGGGAAACTGCACTTCATGGGGGAGGTGGTGGCAAGGCACAAAAAGAAAGAGCGGCTGCACTTGCTGCAATTTTAGCTGCTAGGTCACGCATTAAAGAGGATTCCAAGGAGAATGCTAAAGGAGAGGAGAAACCAACGCAGGCATTTAGTATTGTGGATGCTGCATCTGCCTCAGTACATGGAAGAAGTGCAGCTGCTGCAAAAGCTGCACCAAGTGAAAAAACTGCTGCTCGAATTGCGATGCACATGGCGGGTGAGAGGGCACCAGTAAATGCTAAAATGGTAAAGAGTCGTTACACTACTGGTGCTGCATCCCGGTCCTTCACATCTACATCTTACGACCCTGTTACAAAGAATGAACATGAATATATCAAGGTTGAGAAAAACCCAAAGAAGAAAGGATATGTACAGTTGCATACAACACATGGAGATTTGAATATTGAACTACATTGTGATATTACTCCAAGAACATGTGAGAATTTCATCACACTTTGTGAAAATGGCTACTACAATGGAGTTGCTTTTCATAGAAGTATTAGGAACTTTATGATTCAAGGTGGTGATCCAACTGGTACTGGGAGAGGGGGTGAATCTATATGGGGAAAGCCCTTCAAAGATGAACTTAACTCCAAGTTGCTTCATTCTGGAAGGGGTGTTGTCAGTATGGCAAATAGTGGTCCCCACACTAATGGTTCCCAGTTCTTTATTCTTTACAAATCTGCCAATCACTTAAACTTCAAGCATACTGTATTTGGCGGTGTTGTTGGTGGGTTGACTGCTTTGGCAGCAATGGAAAAGGTTCCTGTTGATGACAACGATCAGCCTCTGGAGGAGATCAAGATAACAAGCGTCACCGTTTTTGTGAATCCATACTCAGAACCCGATGAAGAGGAAGAAAAGCAAAAAGACGAGAAGAATGTGGAGGATGAAGAAAACGATAAGGTTGGGTCATGGTATAGTAACCCAGGCACCGGGGTAGCTGAAGACGGAGCTGCTGGTGGCGGTGTAGGGAAATATTTGAAAGCAAGAAATGCCCAATCCAAACCCCCTGCTGTTGATGGTAGTCTAAAACAAACTACCTCGACCAAGAAAAGAACAGCTGCAGGAGAATTCAAAGACTTCTCTTCATGGTAA 3663 43.11 MVYAKQIKQFLQGAFTIVIVLFEKKQSSGDSLCGFHFQVTAEPLSRTLPLLSTSSFCLATAISEQNYRWMHTHCLRNYLRHLLRLTSFNALFNFNLVLERGFRRSCESLFETTIRCFLIHFSVFFVDLWHAASLFSSEMVTLQSVRPLVRMYEYRPLISPSLGRLKPANVAVNNAIGLERSCGAWGFCCDAVATSFLRPFKAAKSNCSAIHGTYVGKSRCILFIQTVASKNLCPRRKVNHKITSLVMVPNALKIALAYRKGCHETSTGGKSTNIVWHDCPIGKPQREKLIQQKGCVIWITGLSGSEACKTYFTDQICRTDHPSLYDCPSAIWIDIILLMHRVYNYSLSLSLSHTPRALIIGKSTLACALSQGLHSRRKLTYILDGDNIRHGLNSDLSFAPEDRAENIRRIGGCPFLSDEKFSLTRSIGEVASLFADAGIICIASLISPFRKDRDACRALLAEGDFIEVFLDVPLNVCEARDPKGLYKLSRAGKIQGFTGIDDPYEEPLNSEIVLQYKEGICSSPIDMAERVISYLEERGRKRNYSSYFSLLGNISFPSVSAFQFLGHLAFFLRIRTIVTTCRQKVSFGNLVWILSWCGRRSPNCRDSPASEFEAQRGKGRWGRNSTVKTVCLLRKLNGPPNGVAPNPRTLKPLSNGFLSIAAQLLLHFNGRLTFTPFEYPVCTADGSVFEIMNIIPYIRKYGKNPVTGASLKQEELIPLIFHKNSEGEFQCPVLNKVFTEFTHIVAIKTTGNVFCYEAVKELNIKTKNWKELLTDEPFSRGDIITIQNPTALDSKVLLDFDHVKNSLKVDDEELQKMKSDPTYNINVSGDIKQMLQELGTEKGRETALHGGGGGKAQKERAAALAAILAARSRIKEDSKENAKGEEKPTQAFSIVDAASASVHGRSAAAAKAAPSEKTAARIAMHMAGERAPVNAKMVKSRYTTGAASRSFTSTSYDPVTKNEHEYIKVEKNPKKKGYVQLHTTHGDLNIELHCDITPRTCENFITLCENGYYNGVAFHRSIRNFMIQGGDPTGTGRGGESIWGKPFKDELNSKLLHSGRGVVSMANSGPHTNGSQFFILYKSANHLNFKHTVFGGVVGGLTALAAMEKVPVDDNDQPLEEIKITSVTVFVNPYSEPDEEEEKQKDEKNVEDEENDKVGSWYSNPGTGVAEDGAAGGGVGKYLKARNAQSKPPAVDGSLKQTTSTKKRTAAGEFKDFSSW 1220
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 7212493 7224190 + Lsi01G008960.1 Lsi01g00896 653554

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Lsi01g00896 1220 Pfam Adenylylsulphate kinase 416 517 - -
Lsi01g00896 1220 Pfam Adenylylsulphate kinase 361 411 - -
Lsi01g00896 1220 SUPERFAMILY Cyclophilin-like 978 1144 IPR029000 -
Lsi01g00896 1220 SUPERFAMILY RING/U-box 671 732 - -
Lsi01g00896 1220 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 672 1218 IPR044666 -
Lsi01g00896 1220 MobiDBLite consensus disorder prediction 1136 1158 - -
Lsi01g00896 1220 Gene3D - 270 541 IPR027417 -
Lsi01g00896 1220 SMART Ubox_2 667 729 IPR003613 GO:0004842|GO:0016567
Lsi01g00896 1220 MobiDBLite consensus disorder prediction 1194 1208 - -
Lsi01g00896 1220 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 982 1129 IPR002130 GO:0000413|GO:0003755
Lsi01g00896 1220 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 361 538 IPR027417 -
Lsi01g00896 1220 CDD APSK 361 514 IPR002891 GO:0000103|GO:0004020|GO:0005524
Lsi01g00896 1220 CDD cyclophilin_RING 978 1136 - -
Lsi01g00896 1220 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 1013 1030 IPR020892 GO:0003755|GO:0006457
Lsi01g00896 1220 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 978 1129 IPR002130 GO:0000413|GO:0003755
Lsi01g00896 1220 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 671 723 IPR013083 -
Lsi01g00896 1220 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 1061 1076 IPR002130 GO:0000413|GO:0003755
Lsi01g00896 1220 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 1018 1030 IPR002130 GO:0000413|GO:0003755
Lsi01g00896 1220 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 992 1007 IPR002130 GO:0000413|GO:0003755
Lsi01g00896 1220 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 1076 1088 IPR002130 GO:0000413|GO:0003755
Lsi01g00896 1220 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 1089 1104 IPR002130 GO:0000413|GO:0003755
Lsi01g00896 1220 PANTHER RING-TYPE E3 UBIQUITIN-PROTEIN LIGASE PPIL2 672 1218 - -
Lsi01g00896 1220 MobiDBLite consensus disorder prediction 1132 1220 - -
Lsi01g00896 1220 CDD RING-Ubox_PPIL2 672 738 IPR026951 -
Lsi01g00896 1220 Coils Coil 1136 1156 - -
Lsi01g00896 1220 ProSiteProfiles U-box domain profile. 663 736 IPR003613 GO:0004842|GO:0016567
Lsi01g00896 1220 Gene3D - 958 1143 IPR029000 -
Lsi01g00896 1220 TIGRFAM apsK: adenylyl-sulfate kinase 361 516 IPR002891 GO:0000103|GO:0004020|GO:0005524
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi01g00896 K10598 PPIL2, CYC4, CHP60; peptidyl-prolyl cis-trans isomerase-like 2 [EC:5.2.1.8] - csv:101204462 977.237
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi01g00896 Lsi-Chr1:7212493 Lsi03g01016 Lsi-Chr3:19567621 3.23E-79 dispersed
Lsi05g01974 Lsi-Chr5:26855016 Lsi01g00896 Lsi-Chr1:7212493 9.58E-18 dispersed
Lsi11g01616 Lsi-Chr11:24488651 Lsi01g00896 Lsi-Chr1:7212493 4.39E-31 dispersed
Lsi01g00896 Lsi-Chr1:7212493 Lsi11g01025 Lsi-Chr11:17432350 2.67E-31 transposed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Lsi03g01518 . 1 1097 U-box Gene Family AT5G15400 70.7 0.0e+00 1494.2
Lsi10g00540 . 168 756 U-box Gene Family AT2G23140 64.5 4.3e-114 409.1
Lsi08g01601 . 1 779 U-box Gene Family AT1G24330 59.2 8.5e-242 833.6
Lsi04g00666 . 45 799 U-box Gene Family AT1G24330 57.9 4.1e-228 788.1
Lsi08g01601 . 1 778 U-box Gene Family AT1G67530 59.9 2.1e-240 828.9
Lsi04g00666 . 45 800 U-box Gene Family AT1G67530 56.8 1.8e-223 772.7
Lsi01g00373 . 1 362 U-box Gene Family AT4G21350 61.5 4.4e-119 424.9
Lsi05g01140 . 135 460 U-box Gene Family AT3G07360 55.3 4.9e-82 301.6
Lsi04g01143 CCT 260 419 U-box Gene Family AT1G71020 72.0 3.5e-60 229.6
Lsi04g00088 . 213 414 U-box Gene Family AT1G71020 51.2 4.4e-47 186.0
Lsi10g01368 . 305 474 U-box Gene Family AT1G71020 56.2 8.4e-46 181.8
Lsi02g01363 . 288 481 U-box Gene Family AT1G71020 50.8 6.0e-44 175.6
Lsi04g01143 CCT 16 623 U-box Gene Family AT1G23030 55.4 2.3e-96 350.1
Lsi10g01368 . 143 684 U-box Gene Family AT2G28830 51.0 5.5e-100 362.1
Lsi02g01363 . 117 689 U-box Gene Family AT2G28830 56.9 6.0e-99 358.6
Lsi02g01363 . 16 720 U-box Gene Family AT3G46510 64.3 1.1e-160 563.9
Lsi10g01368 . 3 687 U-box Gene Family AT3G46510 62.2 4.4e-154 542.0
Lsi04g00088 . 9 623 U-box Gene Family AT3G46510 58.1 4.0e-123 439.1
Lsi04g00088 . 10 625 U-box Gene Family AT3G54850 68.7 1.3e-166 583.6
Lsi10g01368 . 13 677 U-box Gene Family AT3G54850 53.4 2.8e-110 396.4
Lsi02g01363 . 23 681 U-box Gene Family AT3G54850 52.6 5.2e-96 349.0
Lsi10g00826 . 93 648 U-box Gene Family AT5G42340 64.0 1.1e-115 414.5
Lsi01g01607 . 9 669 U-box Gene Family AT5G01830 57.4 1.1e-197 686.8
Lsi02g00832 . 1 714 U-box Gene Family AT1G29340 65.9 4.4e-248 854.4
Lsi05g00339 . 27 435 U-box Gene Family AT5G37490 50.5 4.5e-107 385.2
Lsi10g01136 . 10 410 U-box Gene Family AT3G52450 50.9 3.7e-117 418.7
Lsi03g01816 . 1 404 U-box Gene Family AT3G52450 50.6 1.0e-114 410.6
Lsi01g01651 . 14 155 U-box Gene Family AT3G52450 57.7 4.9e-45 179.1
Lsi03g01816 . 1 403 U-box Gene Family AT2G35930 54.5 1.7e-119 426.4
Lsi10g01136 . 10 409 U-box Gene Family AT2G35930 52.3 1.3e-116 416.8
Lsi01g01651 . 14 158 U-box Gene Family AT2G35930 56.6 1.4e-46 184.1
Lsi05g00219 . 9 424 U-box Gene Family AT3G19380 64.2 2.8e-146 515.4
Lsi05g00219 . 1 424 U-box Gene Family AT1G49780 64.6 4.5e-152 534.6
Lsi01g01136 CCT 1 407 U-box Gene Family AT5G64660 53.9 1.4e-121 433.3
Lsi01g01136 CCT 1 407 U-box Gene Family AT5G09800 50.8 3.6e-106 382.1
Lsi04g01467 CCT 1 454 U-box Gene Family AT3G49810 63.5 2.4e-156 548.9
Lsi08g01540 CCT 1 454 U-box Gene Family AT3G49810 61.5 5.8e-150 527.7
Lsi04g01467 CCT 1 454 U-box Gene Family AT5G65920 62.4 2.6e-150 528.9
Lsi08g01540 CCT 1 454 U-box Gene Family AT5G65920 62.3 6.3e-149 524.2
Lsi05g01216 . 2172 2672 U-box Gene Family AT3G49060 50.2 7.4e-137 485.0
Lsi05g02044 CCT 1 880 U-box Gene Family AT2G45910 50.2 2.5e-223 772.3
Lsi09g00480 . 22 822 U-box Gene Family AT4G25160 51.9 1.3e-214 743.4
Lsi02g01538 . 1 548 U-box Gene Family AT5G40140 53.8 2.7e-96 349.7
Lsi08g00778 . 4 813 U-box Gene Family AT1G76390 60.8 1.1e-268 922.9
Lsi08g00778 . 13 813 U-box Gene Family AT1G20780 61.8 2.4e-279 958.4
Lsi08g01601 . 1 780 U-box Gene Family AT1G27910 62.0 1.2e-264 909.4
Lsi04g00666 . 45 811 U-box Gene Family AT1G27910 62.7 1.5e-262 902.5
Lsi01g00896 . 672 1220 U-box Gene Family AT5G67530 73.8 1.6e-235 812.4
Lsi03g01872 . 12 162 U-box Gene Family AT5G67530 50.3 9.1e-42 168.7
Lsi01g00816 . 6 802 U-box Gene Family AT5G65500 50.2 1.3e-208 723.4
Lsi05g01766 . 1 517 U-box Gene Family AT1G04510 74.4 6.6e-222 766.9
Lsi05g01766 . 1 486 U-box Gene Family AT2G33340 73.6 4.6e-209 724.2
Lsi05g01139 . 9 150 U-box Gene Family AT3G07370 59.2 5.2e-40 161.8
Lsi03g01518 . 1 1097 U-box Gene Family AT5G15400 70.7 0.0e+00 1494.2
Lsi10g00540 . 168 756 U-box Gene Family AT2G23140 64.5 4.3e-114 409.1
Lsi08g01601 . 1 779 U-box Gene Family AT1G24330 59.2 8.5e-242 833.6
Lsi04g00666 . 45 799 U-box Gene Family AT1G24330 57.9 4.1e-228 788.1
Lsi08g01601 . 1 778 U-box Gene Family AT1G67530 59.9 2.1e-240 828.9
Lsi04g00666 . 45 800 U-box Gene Family AT1G67530 56.8 1.8e-223 772.7
Lsi01g00373 . 1 362 U-box Gene Family AT4G21350 61.5 4.4e-119 424.9
Lsi05g01140 . 135 460 U-box Gene Family AT3G07360 55.3 4.9e-82 301.6
Lsi04g01143 CCT 260 419 U-box Gene Family AT1G71020 72.0 3.5e-60 229.6
Lsi04g00088 . 213 414 U-box Gene Family AT1G71020 51.2 4.4e-47 186.0
Lsi10g01368 . 305 474 U-box Gene Family AT1G71020 56.2 8.4e-46 181.8
Lsi02g01363 . 288 481 U-box Gene Family AT1G71020 50.8 6.0e-44 175.6
Lsi04g01143 CCT 16 623 U-box Gene Family AT1G23030 55.4 2.3e-96 350.1
Lsi10g01368 . 143 684 U-box Gene Family AT2G28830 51.0 5.5e-100 362.1
Lsi02g01363 . 117 689 U-box Gene Family AT2G28830 56.9 6.0e-99 358.6
Lsi02g01363 . 16 720 U-box Gene Family AT3G46510 64.3 1.1e-160 563.9
Lsi10g01368 . 3 687 U-box Gene Family AT3G46510 62.2 4.4e-154 542.0
Lsi04g00088 . 9 623 U-box Gene Family AT3G46510 58.1 4.0e-123 439.1
Lsi04g00088 . 10 625 U-box Gene Family AT3G54850 68.7 1.3e-166 583.6
Lsi10g01368 . 13 677 U-box Gene Family AT3G54850 53.4 2.8e-110 396.4
Lsi02g01363 . 23 681 U-box Gene Family AT3G54850 52.6 5.2e-96 349.0
Lsi10g00826 . 93 648 U-box Gene Family AT5G42340 64.0 1.1e-115 414.5
Lsi01g01607 . 9 669 U-box Gene Family AT5G01830 57.4 1.1e-197 686.8
Lsi02g00832 . 1 714 U-box Gene Family AT1G29340 65.9 4.4e-248 854.4
Lsi05g00339 . 27 435 U-box Gene Family AT5G37490 50.5 4.5e-107 385.2
Lsi10g01136 . 10 410 U-box Gene Family AT3G52450 50.9 3.7e-117 418.7
Lsi03g01816 . 1 404 U-box Gene Family AT3G52450 50.6 1.0e-114 410.6
Lsi01g01651 . 14 155 U-box Gene Family AT3G52450 57.7 4.9e-45 179.1
Lsi03g01816 . 1 403 U-box Gene Family AT2G35930 54.5 1.7e-119 426.4
Lsi10g01136 . 10 409 U-box Gene Family AT2G35930 52.3 1.3e-116 416.8
Lsi01g01651 . 14 158 U-box Gene Family AT2G35930 56.6 1.4e-46 184.1
Lsi05g00219 . 9 424 U-box Gene Family AT3G19380 64.2 2.8e-146 515.4
Lsi05g00219 . 1 424 U-box Gene Family AT1G49780 64.6 4.5e-152 534.6
Lsi01g01136 CCT 1 407 U-box Gene Family AT5G64660 53.9 1.4e-121 433.3
Lsi01g01136 CCT 1 407 U-box Gene Family AT5G09800 50.8 3.6e-106 382.1
Lsi04g01467 CCT 1 454 U-box Gene Family AT3G49810 63.5 2.4e-156 548.9
Lsi08g01540 CCT 1 454 U-box Gene Family AT3G49810 61.5 5.8e-150 527.7
Lsi04g01467 CCT 1 454 U-box Gene Family AT5G65920 62.4 2.6e-150 528.9
Lsi08g01540 CCT 1 454 U-box Gene Family AT5G65920 62.3 6.3e-149 524.2
Lsi05g01216 . 2172 2672 U-box Gene Family AT3G49060 50.2 7.4e-137 485.0
Lsi05g02044 CCT 1 880 U-box Gene Family AT2G45910 50.2 2.5e-223 772.3
Lsi09g00480 . 22 822 U-box Gene Family AT4G25160 51.9 1.3e-214 743.4
Lsi02g01538 . 1 548 U-box Gene Family AT5G40140 53.8 2.7e-96 349.7
Lsi08g00778 . 4 813 U-box Gene Family AT1G76390 60.8 1.1e-268 922.9
Lsi08g00778 . 13 813 U-box Gene Family AT1G20780 61.8 2.4e-279 958.4
Lsi08g01601 . 1 780 U-box Gene Family AT1G27910 62.0 1.2e-264 909.4
Lsi04g00666 . 45 811 U-box Gene Family AT1G27910 62.7 1.5e-262 902.5
Lsi01g00896 . 672 1220 U-box Gene Family AT5G67530 73.8 1.6e-235 812.4
Lsi03g01872 . 12 162 U-box Gene Family AT5G67530 50.3 9.1e-42 168.7
Lsi01g00816 . 6 802 U-box Gene Family AT5G65500 50.2 1.3e-208 723.4
Lsi05g01766 . 1 517 U-box Gene Family AT1G04510 74.4 6.6e-222 766.9
Lsi05g01766 . 1 486 U-box Gene Family AT2G33340 73.6 4.6e-209 724.2
Lsi05g01139 . 9 150 U-box Gene Family AT3G07370 59.2 5.2e-40 161.8
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005406 1 2 3 1 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 2 1 1 39
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Lsi01g00896 Lsi_Chr01 FPKM 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0