Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi01g00911 | ATGGGTCGCTTCAATCTCCTTATTGCACTCTCTCTTCTTTCTCTCTTCTTCGTTCCTTCCCCAACACTCGCCCAACTCCGACAAAACTTCTACGCCAATATCTGCCCCAATGTCGAAAACATTGTCCGCTCCGAAGTTAACAAAAAATTTCAACAAACTTTCGTCACTGTTCCCGCCACTCTCCGCCTCTTCTTCCACGATTGCTTTGTTCAGGGATGTGATGCCTCTGTAATTATTGCTTCCACCGCATCCAACAAGGCCGAGAAGGACCATCCCGATAACCTCTCACTCGCCGGCGATGGATTCGACACCGTCATCAAAGCGAAAGCCGCCCTCGACGCCATCCCTCAATGCCGAAACAGAGTCTCCTGTGCCGATATTCTCGCTTTAGCCACTCGTGACGTCATCGCATTGTCTGGTGGACCGTCGTACGCGGTGGAGCTGGGAAGATTAGACGGCCTGGTTTCTAGAGCCTCCGACGTGAACGGGAGACTCCCAGCACCGACGTTTAATCTCAATCAGCTTAATTCTCTGTTTGCCGCGAATGGTCTTACACAACAAGACATGATCGCACTCTCAGCGGCTCACACCGTCGGATTCTCCCACTGCGGGAAATTCTCAAATCGAATTTACAGCTTTGCCCCTGGTAGACCAGTGGACCCTACACTAAACAAAACGTATGCAGCCCAGCTACAAGCGATGTGCCCGAAGAATGTGGACCCAAGAGTGGCGATTAACATGGACCCAATCACCCCTAGGGCGTTTGACAACATTTACTTTAGAAATCTACAGCAAGGGATGGGGCTGTTCACGTCGGACCAGGTTCTGTTTAGCGACGCCAGGTCCAGGCCCACTGTGAACGCGTGGGCTAGCAACTCCCAAGCCTTTAATAAAGCATTTATTGAAGCTATGACTAAGTTGGGGCGGGTGGGGGTCAAGACTGGTAGAAACGGTAATATTCGGCGCGATTGTGGAGCTTTCAATTGA | 987 | 51.06 | MGRFNLLIALSLLSLFFVPSPTLAQLRQNFYANICPNVENIVRSEVNKKFQQTFVTVPATLRLFFHDCFVQGCDASVIIASTASNKAEKDHPDNLSLAGDGFDTVIKAKAALDAIPQCRNRVSCADILALATRDVIALSGGPSYAVELGRLDGLVSRASDVNGRLPAPTFNLNQLNSLFAANGLTQQDMIALSAAHTVGFSHCGKFSNRIYSFAPGRPVDPTLNKTYAAQLQAMCPKNVDPRVAINMDPITPRAFDNIYFRNLQQGMGLFTSDQVLFSDARSRPTVNAWASNSQAFNKAFIEAMTKLGRVGVKTGRNGNIRRDCGAFN | 328 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 7369170 | 7371074 | - | Lsi01G009110.1 | Lsi01g00911 | 653569 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi01g00911 | 328 | CDD | secretory_peroxidase | 25 | 327 | IPR033905 | GO:0004601|GO:0042744 | |
Lsi01g00911 | 328 | PRINTS | Haem peroxidase superfamily signature | 188 | 203 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi01g00911 | 328 | PRINTS | Haem peroxidase superfamily signature | 140 | 152 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi01g00911 | 328 | PRINTS | Haem peroxidase superfamily signature | 122 | 139 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi01g00911 | 328 | PRINTS | Haem peroxidase superfamily signature | 248 | 263 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi01g00911 | 328 | PRINTS | Haem peroxidase superfamily signature | 57 | 71 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi01g00911 | 328 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 188 | 198 | IPR019793 | - | |
Lsi01g00911 | 328 | PRINTS | Plant peroxidase signature | 140 | 155 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi01g00911 | 328 | PRINTS | Plant peroxidase signature | 35 | 54 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi01g00911 | 328 | PRINTS | Plant peroxidase signature | 59 | 79 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi01g00911 | 328 | PRINTS | Plant peroxidase signature | 262 | 279 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi01g00911 | 328 | PRINTS | Plant peroxidase signature | 100 | 113 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi01g00911 | 328 | PRINTS | Plant peroxidase signature | 302 | 315 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi01g00911 | 328 | PRINTS | Plant peroxidase signature | 121 | 131 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi01g00911 | 328 | PRINTS | Plant peroxidase signature | 187 | 199 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi01g00911 | 328 | PRINTS | Plant peroxidase signature | 246 | 261 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi01g00911 | 328 | Pfam | Peroxidase | 42 | 291 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi01g00911 | 328 | ProSitePatterns | Peroxidases active site signature. | 57 | 68 | IPR019794 | GO:0004601 | |
Lsi01g00911 | 328 | PANTHER | PEROXIDASE | 8 | 328 | - | - | |
Lsi01g00911 | 328 | PANTHER | - | 8 | 328 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi01g00911 | 328 | Gene3D | Peroxidase, domain 2 | 166 | 307 | - | - | |
Lsi01g00911 | 328 | SUPERFAMILY | Heme-dependent peroxidases | 25 | 328 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi01g00911 | 328 | Gene3D | - | 29 | 328 | - | - | |
Lsi01g00911 | 328 | ProSiteProfiles | Plant heme peroxidase family profile. | 25 | 328 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi01g00911 | Lsi-Chr1:7369170 | Lsi03g00401 | Lsi-Chr3:4590150 | 6.31E-148 | dispersed | |
Lsi01g00911 | Lsi-Chr1:7369170 | Lsi02g00351 | Lsi-Chr2:3006170 | 3.05E-97 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi01g00911 | K00430 | - | csv:101206860 | 616.69 |