Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi01g00922 ATGGCAAACCCGGTTTGGATTTTTCTACTTTTCTGTTTCTTTTCTGTGCCGTCCATGGCTGCCGCACAGAAGAAGAAGACTTACATCGTGCATATGGCCAAGTACCAAATGCCTGAGAGTTTTGAGCACCACTTGCACTGGTACGACTCCTCACTCAGATCCGTGTCCGATACTGCTGAGATGATCTATGCTTACAACAACGTCGTTCATGGGTTTTCAACCAGATTGACGGCGGAGGAAGCTCAGCGGCTCGAGGCCCAACCTGGGATTCTGGCTGTGGTGCCAGAGATGAGATATGAACTTCATACCACTCGTACTCCGCAGTTTCTTGGACTCGACAAGAATGCAAATCTTTACCCTGAATCCAACTCCGTGTCGGAGGTCATCATCGGAGTTTTGGATACTGGGATTTGGCCGGAAAGTAAGAGTTTCGATGATACTGGGCTTGGACCGGTACCAAGTAGCTGGAAGGGTGAGTGTGAATCAGGTACTAATTTCAGTGCGTCGAACTGTAACAGGAAGCTGATTGGAGCCAGATTTTTCTCCAAGGGCTACGAGGCGACTCTCGGTCCGATCGATGAATCAAAAGAATCGAGATCTCCGAGAGATGACGATGGCCATGGAACCCACACCGCTACCACTGCCGCCGGTTCTGTAGTTGAAAACGCAAGCTTATTTGGATATGCCTCCGGCACCGCCCGCGGGATGGCCGCGCGTGCAAGGGTCGCCGCCTATAAGGTTTGCTGGGCCGGCGGATGTTTCAGCTCCGATATCTTAGCCGCCATTGAAAAGGCTGTGGAGGACAATGTTAATGTCCTTTCCATGTCACTTGGCGGTGGAGTATCCGATTATTACAAAGACAGTGTTGCCACAGGAGCATTCGCTGCCATGGAGAAAGGCATTCTCATTTCTTGCTCTGCCGGAAATGCCGGCCCCAGTCCTTACAGCTTGTCAAATACGTCTCCATGGATAACAACCGTCGGTGCCGGAACATTAGATCGCGATTTTCCGGCTTATGTCAGTCTTGGCGACGCCAAGAACTTCTCCGGCGTTTCGCTCTATCGAGGCAAGCCATTACCGGGAACATTGTTGCCTTTTATTTATGCTGCTAATGCAAGTAACTCTGGTAATGGCAATTTGTGTATGACCGGTACCTTGATCCCTGAAAAAGTCGCCGGAAAGATCGTGTTCTGCGATCGAGGTGTAAACCCTAGGGTTCAGAAAGGTGCGGTCGTCAAAGCCGCAGGTGGAATCGGAATGGTGCTGGCCAATACTCCCGCAAATGGAGAAGAGCTGGTTGCTGACTCTCATCTTCTACCGGCCACGGCGGTCGGTCAGAAATCCGGCGACATTATACGGAAGTATCTCATTTCGGAGCCCAATCCGACGGTGACGATCTTATTCGAAGGGACTAAATTGGGGATCGAACCATCGCCGGTGGTGGCGGCTTTTAGCTCCCGAGGACCAAATTCGATCACTCCTCAGTTGCTGAAACCCGACATAATAGCCCCTGGCGTCAACATCTTAGCTGGATGGTCAAAATCAGTGGGACCAAGTGGTTTAGCCATTGATGACAGACGAGTGGATTTCAACATTATCTCTGGAACCTCCATGTCCTGCCCCCATGTGAGCGGTCTCGCTGCTCTGATCAAGGGCGCTCATCCCGATTGGAGTCCGGCGGCGATTCGTTCGGCGTTGATGACAACAGCCTACACAGCCTACAAAAACGGCCAAAAGATCCAAGATATCGCCACCGGAAAACCATCCACCCCATTCGATCACGGAGCCGGACACGTCGATCCCGCATCAGCCCTCAATCCGGGTCTTGTTTACGATCTAACGGTGGACGATTACCTAAACTTCCTCTGCGCACTCAACTACACTCCGTCGCAGATCAACTCACTGGCAAGGAGAGATTTCACTTGCGACTCCAAGAAGAAGTACAGTGTCAACGATCTCAACTACCCTTCTTTCGCCGTCGTTTTCGACGGCGTATTGGGCGGCGGAGGCAGTGGTTCCAGTGTAGTCAAGCACACCAGAACTCTTACAAACGTCGGCTCCCCAGGAACCTACAAAGTCTCAATCTCGTCGGAGACCAAACTAGTGAAAATCTCCGTCGAGCCAGAATCTTTGAGCTTCACCGGAGCCAATGAGAAGAAGTCATACACAGTGACATTCACCGCCGCGGCTGGTTCGGCGGCGCCAGCCAGCGCGGAAGGGTTTGGCCGAATTGAATGGTCAGATGGGAAGCACGTGGTGGGAAGTCCGATTGCGTTTAGCTGGACGTAG 2289 51.99 MANPVWIFLLFCFFSVPSMAAAQKKKTYIVHMAKYQMPESFEHHLHWYDSSLRSVSDTAEMIYAYNNVVHGFSTRLTAEEAQRLEAQPGILAVVPEMRYELHTTRTPQFLGLDKNANLYPESNSVSEVIIGVLDTGIWPESKSFDDTGLGPVPSSWKGECESGTNFSASNCNRKLIGARFFSKGYEATLGPIDESKESRSPRDDDGHGTHTATTAAGSVVENASLFGYASGTARGMAARARVAAYKVCWAGGCFSSDILAAIEKAVEDNVNVLSMSLGGGVSDYYKDSVATGAFAAMEKGILISCSAGNAGPSPYSLSNTSPWITTVGAGTLDRDFPAYVSLGDAKNFSGVSLYRGKPLPGTLLPFIYAANASNSGNGNLCMTGTLIPEKVAGKIVFCDRGVNPRVQKGAVVKAAGGIGMVLANTPANGEELVADSHLLPATAVGQKSGDIIRKYLISEPNPTVTILFEGTKLGIEPSPVVAAFSSRGPNSITPQLLKPDIIAPGVNILAGWSKSVGPSGLAIDDRRVDFNIISGTSMSCPHVSGLAALIKGAHPDWSPAAIRSALMTTAYTAYKNGQKIQDIATGKPSTPFDHGAGHVDPASALNPGLVYDLTVDDYLNFLCALNYTPSQINSLARRDFTCDSKKKYSVNDLNYPSFAVVFDGVLGGGGSGSSVVKHTRTLTNVGSPGTYKVSISSETKLVKISVEPESLSFTGANEKKSYTVTFTAAAGSAAPASAEGFGRIEWSDGKHVVGSPIAFSWT 762
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 7459533 7461821 + Lsi01G009220.1 Lsi01g00922 653580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi01g00922 762 Gene3D - 622 761 - -
Lsi01g00922 762 CDD PA_subtilisin_like 339 466 - -
Lsi01g00922 762 Pfam PA domain 381 451 IPR003137 -
Lsi01g00922 762 ProSitePatterns Serine proteases, subtilase family, serine active site. 535 545 IPR023828 -
Lsi01g00922 762 Pfam Peptidase inhibitor I9 27 102 IPR010259 -
Lsi01g00922 762 Gene3D Peptidase S8/S53 domain 128 618 IPR036852 GO:0004252|GO:0006508
Lsi01g00922 762 Pfam Subtilase family 126 575 IPR000209 GO:0006508|GO:0008236
Lsi01g00922 762 PRINTS Subtilisin serine protease family (S8) signature 203 216 IPR015500 -
Lsi01g00922 762 PRINTS Subtilisin serine protease family (S8) signature 534 550 IPR015500 -
Lsi01g00922 762 PRINTS Subtilisin serine protease family (S8) signature 125 144 IPR015500 -
Lsi01g00922 762 Gene3D - 333 474 - -
Lsi01g00922 762 ProSiteProfiles Serine proteases, subtilase domain profile. 98 605 - -
Lsi01g00922 762 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.7 17 760 - -
Lsi01g00922 762 SUPERFAMILY Subtilisin-like 101 609 IPR036852 GO:0004252|GO:0006508
Lsi01g00922 762 CDD Peptidases_S8_3 99 571 IPR034197 -
Lsi01g00922 762 SUPERFAMILY PA domain 386 452 IPR046450 -
Lsi01g00922 762 MobiDBLite consensus disorder prediction 191 214 - -
Lsi01g00922 762 MobiDBLite consensus disorder prediction 191 209 - -
Lsi01g00922 762 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 17 760 IPR045051 -
Lsi01g00922 762 Pfam Fibronectin type-III domain 652 758 IPR041469 -
Lsi01g00922 762 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 15 102 IPR037045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi01g00922 Lsi-Chr1:7459533 Lsi06g00340 Lsi-Chr6:3784647 0 dispersed
Lsi05g01289 Lsi-Chr5:20693666 Lsi01g00922 Lsi-Chr1:7459533 0 transposed
Lsi01g00922 Lsi-Chr1:7459533 Lsi08g01515 Lsi-Chr8:23224529 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi01g00922 - - csv:101209691 1384.01