Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi01g00943 | ATGGATTTAGACACTTACTTCTTCTACTCTTCCCTCTCTCTTTTCTTTCTTCTTCTTGCTTTCAACCTCATTCGTCGATCTCTTCGAATTCGCCATAATTTACCGCCGAGTCCGCCCTCTCTTTCGATCATCGGTCATCTCCATCTCTTGAAAAAGCCAATACACCGAAATTTCCAGAATCTCTCTGTCAAATATGGTCATGTTATGTCTCTCCGCCTCGGATCTAAGCTCGCAGTTGTTATATCCTCGTCGTCGGCAGCGGAGGAATGTTTCACTAAAAACGACGTCGTTCTCGCCAACCGTCCTCGTTTGCTCATTGGAAAATACATCGGCTATAACTACACTACCATGGTTGGGGCTTCGTACGGTGACCATTGGCGAGACCTTCGTCGAATAGGCGCCATTGAAATCTTCTCTCCATCTCGAATCAACAAATTTGCCGATATTCGGAGGGATGAAGTGAAGCGATTGGTGCGAAAACTATCGCATAATTCGATTAATCAATTCTCGAAAGTAGAAATTCAATTGGCGATGTCGGCGCTGATGTTCAACATCTCAATGAGAATGGCGGCTGGAAAGAGGTATTTTGGCGATGACGTGACGAACGAGGAAGAGGCGAGGAGATTCAGGGAGTTAATTAAAGAGATTGTGGCGATTGCAGGAGTATCAAATCTAGGGGATTTCTTACCCATATTGAACTGGATTTCGAACGATTTTGAGAAGAAATTGACTCAATTGGGGAAGAAAGTGGATGCGTTCATGCAAGGACTAATTGATGATCACCGCAGGAAGAAGGAAGAAGGAAGGAATACGATGATCGATCACTTGCTTTCTCTTCAAGAATCGGAACCCGATCGCTATAACGATCAAATAATCAAAGGATTTATAATGGTAATATTGACTGCAGGTTCCGACTCATCAGCTGTGACAATGGAATGTATCATCTCTGAGACTCTTCGTCTGACTCCCGCAACACCTACGTTGGTTCCCCATTATGCAGCCAATGATTGCACAATATGTGGATACGATGTGCCACGCGACACAATAGTACTAGTCAATGCCTGGGCCATACATAGGGATTCAAATGAATGGGAGGATCCCTTAAGTTTCAAACCAGAGCGACACGAAAAGTCAGAAGCCGTGGAGGTATACAAGTTGTTGCCTTTCGGAGTAGGGAGGCGAGCTTGTCCAGGTTCTGCTATGGCACACAGAGTGATGGGTCTAACTTTGGCAACCCTGATTCAATGCTTTGAGTGGGAGAGGATTGGAGAAGAAGACATCAATATGGACGAGCGGGCTGGTGCCACAATGACTAAGGTGGTGCCATTGGAGGTGATATTCATTTTCAAGATTGAGATTAATAATGACGTGAGATCAAAGAAAAATAAAATAGCGAAGTGA | 1401 | 44.47 | MDLDTYFFYSSLSLFFLLLAFNLIRRSLRIRHNLPPSPPSLSIIGHLHLLKKPIHRNFQNLSVKYGHVMSLRLGSKLAVVISSSSAAEECFTKNDVVLANRPRLLIGKYIGYNYTTMVGASYGDHWRDLRRIGAIEIFSPSRINKFADIRRDEVKRLVRKLSHNSINQFSKVEIQLAMSALMFNISMRMAAGKRYFGDDVTNEEEARRFRELIKEIVAIAGVSNLGDFLPILNWISNDFEKKLTQLGKKVDAFMQGLIDDHRRKKEEGRNTMIDHLLSLQESEPDRYNDQIIKGFIMVILTAGSDSSAVTMECIISETLRLTPATPTLVPHYAANDCTICGYDVPRDTIVLVNAWAIHRDSNEWEDPLSFKPERHEKSEAVEVYKLLPFGVGRRACPGSAMAHRVMGLTLATLIQCFEWERIGEEDINMDERAGATMTKVVPLEVIFIFKIEINNDVRSKKNKIAK | 466 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 7635001 | 7637822 | + | Lsi01G009430.1 | Lsi01g00943 | 653601 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi01g00943 | 466 | PANTHER | CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED | 311 | 450 | - | - | |
Lsi01g00943 | 466 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 8 | 312 | - | - | |
Lsi01g00943 | 466 | PRINTS | E-class P450 group I signature | 396 | 419 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi01g00943 | 466 | PRINTS | E-class P450 group I signature | 62 | 81 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi01g00943 | 466 | PRINTS | E-class P450 group I signature | 86 | 107 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi01g00943 | 466 | PRINTS | E-class P450 group I signature | 181 | 199 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi01g00943 | 466 | PRINTS | E-class P450 group I signature | 312 | 330 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi01g00943 | 466 | PRINTS | E-class P450 group I signature | 353 | 377 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi01g00943 | 466 | PRINTS | E-class P450 group I signature | 386 | 396 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi01g00943 | 466 | Pfam | Cytochrome P450 | 313 | 439 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi01g00943 | 466 | Pfam | Cytochrome P450 | 35 | 314 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi01g00943 | 466 | SUPERFAMILY | Cytochrome P450 | 35 | 448 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi01g00943 | 466 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 389 | 398 | IPR017972 | GO:0005506|GO:0016705 | |
Lsi01g00943 | 466 | Gene3D | Cytochrome P450 | 313 | 445 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi01g00943 | 466 | Gene3D | Cytochrome P450 | 20 | 312 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi01g00943 | 466 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 311 | 450 | - | - | |
Lsi01g00943 | 466 | PANTHER | CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED | 8 | 312 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi01g00941 | Lsi-Chr1:7610909 | Lsi01g00943 | Lsi-Chr1:7635001 | 8.75E-125 | dispersed | |
Lsi01g00943 | Lsi-Chr1:7635001 | Lsi10g00169 | Lsi-Chr10:2729368 | 5.96E-145 | dispersed | |
Lsi10g00171 | Lsi-Chr10:2778155 | Lsi01g00943 | Lsi-Chr1:7635001 | 1.78E-102 | dispersed | |
Lsi01g00942 | Lsi-Chr1:7626212 | Lsi01g00943 | Lsi-Chr1:7635001 | 0 | tandem | |
Lsi01g00943 | Lsi-Chr1:7635001 | Lsi01g00944 | Lsi-Chr1:7654783 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi01g00943 | K13260 | - | csv:101215449 | 703.745 |