Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi01g00995 | ATGAAGGATAACTCCTCTAAATATGTTGTTTTCTTGCTTATGAGCTTCTTTTTCTTGAATCATCTCCTTGTGTCCTCACAACTTGATTATAGGTTCTATGATGCCTCTTGTCCCAACCTAACAAGGATTATAAGATATGGCGTCTGGATGGCAGTTTCTAATGATACTAGGATGGCTGCTTCTCTCTTACGGCTTCATTTTCATGATTGCTTTGTCAACGGTTGTGATGGATCATTATTGCTTGATGACACTAGCACATTTAAGGGGGAGAAAAATGCATTGCCGAATATGAACTCAGTTCGAGGATATGAGGTCATTGATAATATAAAGGCTGTCTTAGAGAAAGTCTGCCCATGTGTTGTCTCATGTACTGATATAGTAACTCTAGCAGCTAGAGAGGCTGTCTACCTTGCTGGGGGACCTTTTTGGCAAATTCCACTTGGTCGCCGAGATGGCACGACAGCAAGCGAGAGTGAAGCCAATCAGCTGCCATCACCAGTAGAGCCATTGGAGAATATCATTGCGAAATTCACTTCGAAAGGGCTTGATCTGAAGGATCTTGTTGCTCTCTCAGGTGCACACACTTTCGGATTTGCTCGTTGTATGATGTTCAAGCATAGGCTATTCAACTTTGACGGTGCTGGAAATCCTGATCCAGAACTCGACGTCATGCTGCGACAGAACTTACAGAGCAACTGTCCAAATCAAGATGACTCCAACAACAAATTTGCCCCCTTGGATGCCTACACGATCAACCGGTTTGACAATGTGTATTACAGGAACTTGGTGAACAAGTTGGGACTTCTGCAGTCAGACCAAGCTCTCATGAAAGATAATACAACTGCTTCTTTGGTGGTGAACTACAGCAGGTATCCATATCTGTTTTACAGGGACTTTGGAGCATCAATGGTGAAGCTGGCCAATACTGGTATCCTTACAGGCCAAAATGGGGAAATTAGGAAGGATTGCAGGGTGGTGAACTAG | 984 | 43.6 | MKDNSSKYVVFLLMSFFFLNHLLVSSQLDYRFYDASCPNLTRIIRYGVWMAVSNDTRMAASLLRLHFHDCFVNGCDGSLLLDDTSTFKGEKNALPNMNSVRGYEVIDNIKAVLEKVCPCVVSCTDIVTLAAREAVYLAGGPFWQIPLGRRDGTTASESEANQLPSPVEPLENIIAKFTSKGLDLKDLVALSGAHTFGFARCMMFKHRLFNFDGAGNPDPELDVMLRQNLQSNCPNQDDSNNKFAPLDAYTINRFDNVYYRNLVNKLGLLQSDQALMKDNTTASLVVNYSRYPYLFYRDFGASMVKLANTGILTGQNGEIRKDCRVVN | 327 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 8224675 | 8226617 | - | Lsi01G009950.1 | Lsi01g00995 | 653653 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi01g00995 | 327 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 186 | 196 | IPR019793 | - | |
Lsi01g00995 | 327 | Gene3D | Peroxidase, domain 2 | 164 | 306 | - | - | |
Lsi01g00995 | 327 | PRINTS | Haem peroxidase superfamily signature | 186 | 201 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi01g00995 | 327 | PRINTS | Haem peroxidase superfamily signature | 139 | 151 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi01g00995 | 327 | PRINTS | Haem peroxidase superfamily signature | 247 | 262 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi01g00995 | 327 | PRINTS | Haem peroxidase superfamily signature | 121 | 138 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi01g00995 | 327 | PRINTS | Haem peroxidase superfamily signature | 59 | 73 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi01g00995 | 327 | CDD | secretory_peroxidase | 27 | 326 | IPR033905 | GO:0004601|GO:0042744 | |
Lsi01g00995 | 327 | PANTHER | PEROXIDASE | 13 | 326 | - | - | |
Lsi01g00995 | 327 | ProSitePatterns | Peroxidases active site signature. | 59 | 70 | IPR019794 | GO:0004601 | |
Lsi01g00995 | 327 | Gene3D | - | 31 | 327 | - | - | |
Lsi01g00995 | 327 | ProSiteProfiles | Plant heme peroxidase family profile. | 27 | 327 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi01g00995 | 327 | SUPERFAMILY | Heme-dependent peroxidases | 27 | 327 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi01g00995 | 327 | Pfam | Peroxidase | 50 | 290 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi01g00995 | 327 | PRINTS | Plant peroxidase signature | 101 | 114 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi01g00995 | 327 | PRINTS | Plant peroxidase signature | 185 | 197 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi01g00995 | 327 | PRINTS | Plant peroxidase signature | 301 | 314 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi01g00995 | 327 | PRINTS | Plant peroxidase signature | 261 | 278 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi01g00995 | 327 | PRINTS | Plant peroxidase signature | 37 | 56 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi01g00995 | 327 | PRINTS | Plant peroxidase signature | 120 | 130 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi01g00995 | 327 | PRINTS | Plant peroxidase signature | 61 | 81 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi01g00995 | 327 | PRINTS | Plant peroxidase signature | 245 | 260 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi01g00995 | 327 | PRINTS | Plant peroxidase signature | 139 | 154 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi01g00995 | 327 | PANTHER | PEROXIDASE 72-RELATED | 13 | 326 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi01g00995 | Lsi-Chr1:8224675 | Lsi10g01475 | Lsi-Chr10:18880440 | 3.20E-105 | dispersed | |
Lsi06g00967 | Lsi-Chr6:19619446 | Lsi01g00995 | Lsi-Chr1:8224675 | 2.66E-73 | dispersed | |
Lsi02g01227 | Lsi-Chr2:16095810 | Lsi01g00995 | Lsi-Chr1:8224675 | 6.04E-70 | transposed | |
Lsi03g00276 | Lsi-Chr3:3387980 | Lsi01g00995 | Lsi-Chr1:8224675 | 2.62E-85 | transposed | |
Lsi08g01301 | Lsi-Chr8:21380032 | Lsi01g00995 | Lsi-Chr1:8224675 | 1.06E-89 | transposed | |
Lsi10g01503 | Lsi-Chr10:19247609 | Lsi01g00995 | Lsi-Chr1:8224675 | 1.28E-80 | transposed | |
Lsi01g00995 | Lsi-Chr1:8224675 | Lsi10g00311 | Lsi-Chr10:4965744 | 2.70E-131 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi01g00995 | K00430 | - | csv:101218459 | 632.869 |