Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi01g01011 ATGGATCTTGTCTCCTCAGGATCTGATTGCTTTATTAAGCAACTGGAGTTTCTTACTTCTATGGTTTACAGGTACAAAGCTGCTAACCAGAGAGCAATAGAAGCTCTGGATAAGTTTGGAGCAACACTAATGGAAGTAGATGCTGACGGATCATTGTCATATCCAGACCCTCAGATGAATTCAAAAGATAATGCTGACAAACATTCTCGCCCCAAATCGTTGAGTATTGAAGAAGAGCAATTTATGCGAGTATTTTACGAAAACAAACTTCAAGAAGTATGCAACAATTTTCATTTTCCTCATAAAATCCAGGCAACAGCTCTAATATATTTTAAAAGATTCTACCTACAATGGTCCGTGATGCAACATAATCCAAAAAATAGTTTGGAATTTGATCTTATTGTTTATGCACCTTACCGATCAGTTGAAGGCTATATAAATGATATTGAGGAACTCTTCCATGAGAATGCTGAAATGCTTCAAATGCTGAAGGAAACAGCATCATTAGAGGTTGATAAAATTATGTTAACGGATGCCCCACTTCTCTTCCCCCCTGGGCAGTTAGCATTGGCTGCATTGCGCAGATCAAATGAAGTTCATGGAGTTATTGACTTCGATAGCTACCTGGATAGTATCCTCTCTCGCCAGAATTCTGCACATACAATTTCCGAGCTCTACGAGCGTATAAATTCAATTGAATCATTGGTTAATAGATATGCCTTCCCTTCAGAAAAGGATTTAAAGCACATCAACCGAAAATTAAAATCTTGCTGGGGGCTGGGCTCCAATGACGAGAGTAAGAAAAGGGAGAAGAAATCAAAGCACAAATCAAAGAAGAGCTCAAATGAAATGCCAAATATGCCTTTGCACAATTAG 876 38.36 MDLVSSGSDCFIKQLEFLTSMVYRYKAANQRAIEALDKFGATLMEVDADGSLSYPDPQMNSKDNADKHSRPKSLSIEEEQFMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKNSLEFDLIVYAPYRSVEGYINDIEELFHENAEMLQMLKETASLEVDKIMLTDAPLLFPPGQLALAALRRSNEVHGVIDFDSYLDSILSRQNSAHTISELYERINSIESLVNRYAFPSEKDLKHINRKLKSCWGLGSNDESKKREKKSKHKSKKSSNEMPNMPLHN 291
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 8382127 8391392 - Lsi01G010110.1 Lsi01g01011 653669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi01g01011 291 MobiDBLite consensus disorder prediction 259 291 - -
Lsi01g01011 291 PANTHER CYCLIN-H 128 284 - -
Lsi01g01011 291 CDD CYCLIN 82 126 IPR013763 -
Lsi01g01011 291 PANTHER CYCLIN 23 127 IPR043198 GO:0006357|GO:0016538
Lsi01g01011 291 Gene3D - 136 238 - -
Lsi01g01011 291 SUPERFAMILY Cyclin-like 68 126 IPR036915 -
Lsi01g01011 291 MobiDBLite consensus disorder prediction 53 72 - -
Lsi01g01011 291 Gene3D - 45 128 - -
Lsi01g01011 291 PANTHER CYCLIN 128 284 IPR043198 GO:0006357|GO:0016538
Lsi01g01011 291 SUPERFAMILY Cyclin-like 138 259 IPR036915 -
Lsi01g01011 291 Pfam Cyclin C-terminal domain 138 236 IPR031658 -
Lsi01g01011 291 PANTHER CYCLIN-H 23 127 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi01g01011 K06634 - csv:101220754 470.314