Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi01g01158 ATGGCGACCATGAATTCCAGTGTTCTGGCTTGCAACTACGCCATTTCCGGCGCTGGATCGGCTGACCTGAACTCCAAACTCACTGCCGTCCCGTCTGTTGCGACTCCTGGGGTTGCGGGTTACAAGTTGCCTGCGATTAGGGCTCAACAGGCTAGGGTTCCTGAAGCCAAGAACGAAGGAAGGAGGACTGCGCTTCTTTACCTTGGAGCCACCCTCTTTGCTGCGGCTGCGGCTGCCTCCAACTCCTCTGCCAATGCTGGAGTCATTGAAGATTACCTTGAGAAGAGTAAAGCTAACAAGGAATTGAATGACAAGAAAAGATTGGCAACAAGTGGGGCAAACTTTGCAAGGGCATACACTGTTGAATTTGGAACATGCAAGTTCCCAGAGAACTTCACAGGGTGCCAAGATCTTGCTAAACAAAAGAAAGTTCCATTTATCACTGATGATTTGGAATTGGAGTGTGAGGGGAAGGACAAGTACAAGTGTGGTTCCAATGTCTTCTGGAAATGGTGA 516 49.22 MATMNSSVLACNYAISGAGSADLNSKLTAVPSVATPGVAGYKLPAIRAQQARVPEAKNEGRRTALLYLGATLFAAAAAASNSSANAGVIEDYLEKSKANKELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW 171
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 9740127 9741968 - Lsi01G011580.1 Lsi01g01158 653816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi01g01158 171 Gene3D - 87 171 IPR044907 -
Lsi01g01158 171 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC 1 171 - -
Lsi01g01158 171 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC 1 171 IPR008796 GO:0009522|GO:0015979
Lsi01g01158 171 Pfam Photosystem I reaction centre subunit N (PSAN or PSI-N) 44 171 IPR008796 GO:0009522|GO:0015979
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi01g01158 K02701 - csv:101204396 306.605