Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi01g01265 ATGGCAACTTCTGGCTTTCTTCTTTACCTCCTTTCTGCCTCTTCCATCGCCGTTCTCTCTGTTCTCTACCTCTCTAACCCTTCTTCTTCTTCTTCTTCTTCTTCCTCCTCCTCCTCCGCCCTCTCCGCCTCTCTCTCCACAGACAAAACATGGCCGGATTTGGAGCTGAGTTGGAGACTTGTGGCGGCGACGGTGATCGGATTTCTCGGCTCCGCTTGCGGAACCGTTGGAGGAGTCGGCGGCGGCGGCATTTTTGTCCCTATGCTTACTTTGATTATTGGGTTCGACACCAAATCTGCTGCTGCCATTTCCAAATGTATGATAATGGGGGCTTCTACATCATCGGTCTGGTACAATTTAAGAGTGGCTCATCCGACGAAGGATGTGCCGATTATAGATCATGATTTAGCGTTGTTGTTTCAGCCTATGTTGATGCTTGGAATCACCGTTGGTGTTGCCCTTAGCGTCGTTTTCCCCTACTGGCTCATCACTGTTCTTATCATTATTCTCTTTGTTGGGACTTCCTCCAGGTCTTTCTTCAAGGGAATTGAGATGTGGAAAGAAGAAACTATTCTCAAGAAAGAATTTGCCAAACAATGTGAGACTGTTGTGAATTCTCATGGTGAACTATTGATTGATGTAGAGTATGACCCACTGATTCCCAAAGAACCGAAAACAGCACTGGAATTAATGTGCTTCAATCTTAGGTGGAAAAGGACCTCCATTTTGTTAGTTGTTTGGATTTCTTTCCTCATACTTCAAGTTGTGAAGAATGATGCAGCAGTTTGTAGCAATTGGTATTGGATCATCTTCTCCTTGCAGTTCCCAATAGCAATAGGAGTGTTTGGGTATGAAGCAAGAAAGCTATACAAAGAACACAAGAAGAGGATGGAGACAGGGAACTTAGAACACATTTGTGAGGCTTCAATAGGATGGACTGGCACACACCTTGCCTTTTGTGCACTTTGTGGCATTGTTGGAGGCACTGTTGGAGGCCTTTTGGGTTCTGGTGGTGGCTTTGTTTTGGGCCCTTTGCTCTTGGAGATTGGTGTTGTCCCTCAAGTTGCTAGTGCCACAGCAACTTTTGTTATGATGTTCTCCTCTTCCTTATCTGTTGTTGAGTTCTACTTGCTCAACAGGTTTCCCATTCCATATGCTCTATACCTTACATCAGTATCGGTTCTAGCCGGGTTCTGGGGGCAGTTCTTTGTTAGAAAAATGATCACCATTCTAAGGAGAGCCTCACTCATTGTGTTTATCCTCTCTGGTGTCATCTTTGCTAGTGCCATCACCATGGGCATTGTAGGAGTGACAAAAAGTATAACGATGATACAGAACCATGAGTTCATGGGGTTCTTAGATTTCTGCAGCAGTGGGTGA 1380 45.14 MATSGFLLYLLSASSIAVLSVLYLSNPSSSSSSSSSSSSALSASLSTDKTWPDLELSWRLVAATVIGFLGSACGTVGGVGGGGIFVPMLTLIIGFDTKSAAAISKCMIMGASTSSVWYNLRVAHPTKDVPIIDHDLALLFQPMLMLGITVGVALSVVFPYWLITVLIIILFVGTSSRSFFKGIEMWKEETILKKEFAKQCETVVNSHGELLIDVEYDPLIPKEPKTALELMCFNLRWKRTSILLVVWISFLILQVVKNDAAVCSNWYWIIFSLQFPIAIGVFGYEARKLYKEHKKRMETGNLEHICEASIGWTGTHLAFCALCGIVGGTVGGLLGSGGGFVLGPLLLEIGVVPQVASATATFVMMFSSSLSVVEFYLLNRFPIPYALYLTSVSVLAGFWGQFFVRKMITILRRASLIVFILSGVIFASAITMGIVGVTKSITMIQNHEFMGFLDFCSSG 459
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 10884433 10888387 - Lsi01G012650.1 Lsi01g01265 653923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi01g01265 459 PANTHER CEREBLON 2 457 - -
Lsi01g01265 459 Pfam Sulfite exporter TauE/SafE 65 182 IPR002781 GO:0016021
Lsi01g01265 459 Pfam Sulfite exporter TauE/SafE 320 424 IPR002781 GO:0016021
Lsi01g01265 459 PANTHER TRANSMEMBRANE PROTEIN TAUE-RELATED 2 457 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi01g01265 Lsi-Chr1:10884433 Lsi04g02225 Lsi-Chr4:29296514 1.13E-121 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi01g01265 - - bhj:120072699 785.408