Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi01g01266 ATGAAATTGCCGCTTTTTGTTATTCCTTTCATCGCTCTTTCTTGTCTTCTTGCTGTTTTTGGTCCTCAGTTCTCCAGAGATTGGACCATTTTCTTTGATAAATATGCTTCAATCCAGAGCTCTGTTTCTTCTCCCTCCCAAACAGAGCATTTCCATTCTAATACCTCCGCTACGCCGCCGGCGACGGCGGTGACGAATAATCAAACAGTAGAAAAACACGACAAACCTCTGTTCAATGACTCTGTTCTCTCGAATCACTCTGTTTTTTCTTCTTCTTCTTCTTCCCCACCGCCACCACCGAACGACGAAATACAGAGTCTTCAACTACACCTTAATAGGACGAGAGTCAACGAAGATTTGGGAGAAACCGCCATTAATGAAGTGATCAGAAACGTTTCTTCTGAAAGTAATTATGAATCGGCGGTGAAAGTGAAAGCGAGAAGACAAAGGGAATATACAAAATTGGAGAGAATCGAAGCAGGGCTAAGAAGAGCAAGAGCCGCCATTAGAGAAGCAAAGTTCCATAACCAAACACAAGATCCTGACTTTGTTCCTTCTGGCCCAATGTATTGGAATTCCAAAGCATTTCACAGGAGTTACCTAGAAATGGAGAAGGAGATGAAGATCTTCGTGTACGAAGAAGGAGAGCCTCCTCTGTTTCACAATGGCCCCTGCAAAAGCATTTACTCAACCGAAGGCAACTTCATCCATGCTATCGAAATGGACTCCCGATTTCAAACCAAAGATCCCAACAAGGCCCATGTCTTCTTCCTTCCTCTCAGTGTTGCCATGCTCGTTCGGTTTGTCTATGTTCATGACTCCCATGACTTCACTCCAATACGACACACTGTCGTTGATTACATCAATGTCATTGGAACCAAATATCCGTTCTGGAATCGCACACTCGGGGCTGATCATTTCATGCTCTCCTGCCATGATTGGGGTCCGGAAGCATCGAAGTCAGTTCCCCATTTATACAAAAACTCGATTCGAGTACTCTGTAATGCCAACACTTCCGAAGGCTTCAACCCATCAAAGGATGTATCATTCCCAGAAATCAATTTACAAACAGGTTTCTTGACCGGATTTCTTGGCGGCCCATCTCCCTCCCACCGCCCAATTCTGGCCTTTTTCGCCGGTGGGCTTCACGGCCCAATAAGGCCCATTCTAATCCAGCAATGGGAGAATCAAGACCAAGACATTCAAGTCCACCAGTACCTCCCCAAAGGGGTGTCTTACATTGACATGATGAGGAAGAGCAAGTTCTGCCTCTGCCCGAGCGGCTACGAAGTCGCCAGTCCAAGGATTGTCGAGGCTATTTACACTGGGTGTGTTCCCGTCCTCATCTCCGACCACTACGTCCCACCGTTCAGCGATGTCATCAATTGGAAATCTTTCTCCGTGGAAGTCTCGGTCGATGACATTCCGAACTTGAAGAAGATCTTGACGGGAATATCGACGCGGCAGTACTTGAGAATGTATAGGAGAGTGGTGAAAGTTAGAAGACACTTTGAAGTGAACTCTCCGCCGAAGAGATTTGATGTGTATCATATGATACTTCATTCTGTGTGGCTTAGAAGACTCAATCTTAGACTGCGTGATCGTTGA 1608 45.83 MKLPLFVIPFIALSCLLAVFGPQFSRDWTIFFDKYASIQSSVSSPSQTEHFHSNTSATPPATAVTNNQTVEKHDKPLFNDSVLSNHSVFSSSSSSPPPPPNDEIQSLQLHLNRTRVNEDLGETAINEVIRNVSSESNYESAVKVKARRQREYTKLERIEAGLRRARAAIREAKFHNQTQDPDFVPSGPMYWNSKAFHRSYLEMEKEMKIFVYEEGEPPLFHNGPCKSIYSTEGNFIHAIEMDSRFQTKDPNKAHVFFLPLSVAMLVRFVYVHDSHDFTPIRHTVVDYINVIGTKYPFWNRTLGADHFMLSCHDWGPEASKSVPHLYKNSIRVLCNANTSEGFNPSKDVSFPEINLQTGFLTGFLGGPSPSHRPILAFFAGGLHGPIRPILIQQWENQDQDIQVHQYLPKGVSYIDMMRKSKFCLCPSGYEVASPRIVEAIYTGCVPVLISDHYVPPFSDVINWKSFSVEVSVDDIPNLKKILTGISTRQYLRMYRRVVKVRRHFEVNSPPKRFDVYHMILHSVWLRRLNLRLRDR 535
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 10908499 10912120 - Lsi01G012660.1 Lsi01g01266 653924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi01g01266 535 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 15 - -
Lsi01g01266 535 Pfam Exostosin family 204 483 IPR040911 -
Lsi01g01266 535 PANTHER EXOSTOSIN FAMILY PROTEIN 122 533 - -
Lsi01g01266 535 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 122 533 IPR004263 GO:0006486|GO:0016757
Lsi01g01266 535 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 240 479 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi01g01266 Lsi-Chr1:10908499 Lsi08g00153 Lsi-Chr8:3178098 1.16E-171 dispersed
Lsi01g01266 Lsi-Chr1:10908499 Lsi06g01010 Lsi-Chr6:20196167 3.60E-145 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi01g01266 - - csv:101205910 895.19