Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi01g01277 | ATGGCTTCCACTCTCTGTTTTCCCTCTATCACTTTCCCCTCTGCTCCCCTCCACAAACGAATCCCTCTCAGACGAAGAACCCTATCTCCATATCTCTCCATTAAATCCTCCATTGACGAAGGACGAAATCCCTCAACGCCCACAAAGCTTAAGAACTCCACCAACACTGCAAAATCCGGTTCCTGGGTCAGCCCTGATTGGCTCACCTCTCTCACTCGCTACATTACTCTAGGGCAGGGCGACGACTCCGGCATCCCCATTGCAACTGCCAAGCTCGATGACGTTTCTGATCTTCTTGGCGGTGCCCTTTTCCTTCCACTCTTCAAGTGGATGAATGACTATGGACCCATTTACAGGCTCGCTGCTGGCCCTAGAAATTTCGTCGTCGTTAGTGATCCCGCCATTGCTAAGCACGTTCTCAGGAATTATGGGACTTACGCTAAAGGCCTTGTTTCTGAGGTTTCCGAGTTCTTGTTTGGGTCGGGTTTCGCCATTGCAGAAGGCCCTCTCTGGATGGTTCGCCGTAGGGCTGTGGTTCCATCTCTTCACAAGAAGTACTTATCGGTTATTGTTGATCGAGTATTTTGTAAATGTGCCATGAGATTGGTGGAGAAGCTGGAAAAGGATGCATTAAATAATAATTCGGTTAACATGGAGGAAAAGTTTTCTCAACTAACTCTTGATGTTATTGGTCTATCTGTATTCAACTACAGTTTTGATTCTCTCTCTGCTGACAGCCCTATTAAGGCTCTGTGTAAGATAATCCCAAGACAGATAAAAGCTGAAGAAGCAGTTACAGTGATCAGGAGAACTGTTGAAGAACTCATTGCCAAGTGCAAAGAAATTGTTGAAACTGAGGGTGAGCGTATTGATGAGGAGGAATATGTGAACGATGCTGATCCAAGCATCCTCCGATTTCTGCTGGCCAGTAGAGAAGAGGTCTCAAGTGTACAATTACGAGATGATCTATTGTCCATGTTGGTTGCTGGACATGAAACTACTGGCTCTGTTCTGACTTGGACACTGTATCTTTTAAGTAAGCATTCCTCATCATTGGTCAAGGCACAAAATGAAGTTGATAGAGTCTTACAAGGAAGGCCTCCTTCTTATGAAGATACGAAGGAACTTAAATATTTGACACGTTGTATCCTTGAGTCAATGCGTCTTTACCCACATCCACCTGTTTTGATAAGAAGAGCTCAAGTGGCTGACGTACTCCCTGGAAATTACAAGGTTAACGCTGGTCAAGATATCATGATTTCAGTATATAACATCCATCGCTCTTCCCAGGTCTGGGAACAAGCAGAAGAGTTTATACCAGAAAGATTTGACTTGGAAGGCCCTGTGCCTAATGAAAGCAATACAGATTTCAGATTTATTCCGTTCAGCGGTGGGCCTCGAAAGTGTGTTGGTGATCAATTTGCCCTGCTTGAAGCTATTGTTGCACTTGCCATATTTCTACAGCATATGAATTTCGAGCTGGTTCCGAATCAGACCATTGGGATGACTACTGGAGCAACTATACATACAACAAATGGTTTGTACATGAAACTCAGCCAAAGGAAGCTGACCCCAGAATTAGTTTCCCCTGCTTCTTCAAGGTCAGGTGTGAGGTGGGAGATTGAAAGGGCAACTAACATCCTTTGGCATATTCTTTTCCTAGACTTTCCTCTTAATCTCTCTATGCACTTTTCTGGTGGATCTTGGGATTCAGGAATCTTTGAACAGGGCAAGTCAGATTATGTCCTCCACCCTCGTTTTCCTCTTTCTTTTTAA | 1776 | 44.43 | MASTLCFPSITFPSAPLHKRIPLRRRTLSPYLSIKSSIDEGRNPSTPTKLKNSTNTAKSGSWVSPDWLTSLTRYITLGQGDDSGIPIATAKLDDVSDLLGGALFLPLFKWMNDYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTYAKGLVSEVSEFLFGSGFAIAEGPLWMVRRRAVVPSLHKKYLSVIVDRVFCKCAMRLVEKLEKDALNNNSVNMEEKFSQLTLDVIGLSVFNYSFDSLSADSPIKALCKIIPRQIKAEEAVTVIRRTVEELIAKCKEIVETEGERIDEEEYVNDADPSILRFLLASREEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKHSSSLVKAQNEVDRVLQGRPPSYEDTKELKYLTRCILESMRLYPHPPVLIRRAQVADVLPGNYKVNAGQDIMISVYNIHRSSQVWEQAEEFIPERFDLEGPVPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAIFLQHMNFELVPNQTIGMTTGATIHTTNGLYMKLSQRKLTPELVSPASSRSGVRWEIERATNILWHILFLDFPLNLSMHFSGGSWDSGIFEQGKSDYVLHPRFPLSF | 591 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 11033086 | 11040625 | + | Lsi01G012770.1 | Lsi01g01277 | 653935 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi01g01277 | 591 | Gene3D | Cytochrome P450 | 86 | 535 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi01g01277 | 591 | PRINTS | P450 superfamily signature | 329 | 346 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi01g01277 | 591 | PRINTS | P450 superfamily signature | 469 | 480 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi01g01277 | 591 | PRINTS | P450 superfamily signature | 381 | 392 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi01g01277 | 591 | PRINTS | P450 superfamily signature | 460 | 469 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi01g01277 | 591 | MobiDBLite | consensus disorder prediction | 39 | 58 | - | - | |
Lsi01g01277 | 591 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 462 | 471 | IPR017972 | GO:0005506|GO:0016705 | |
Lsi01g01277 | 591 | Pfam | Cytochrome P450 | 107 | 504 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi01g01277 | 591 | PRINTS | E-class P450 group I signature | 111 | 130 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi01g01277 | 591 | PRINTS | E-class P450 group I signature | 318 | 335 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi01g01277 | 591 | PRINTS | E-class P450 group I signature | 469 | 492 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi01g01277 | 591 | PRINTS | E-class P450 group I signature | 421 | 445 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi01g01277 | 591 | PRINTS | E-class P450 group I signature | 338 | 364 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi01g01277 | 591 | PRINTS | E-class P450 group I signature | 459 | 469 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi01g01277 | 591 | PANTHER | CYTOCHROME P450 FAMILY 4 | 123 | 521 | - | - | |
Lsi01g01277 | 591 | PANTHER | CAROTENE EPSILON-MONOOXYGENASE, CHLOROPLASTIC | 123 | 521 | - | - | |
Lsi01g01277 | 591 | SUPERFAMILY | Cytochrome P450 | 100 | 521 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi01g01277 | Lsi-Chr1:11033086 | Lsi05g00806 | Lsi-Chr5:11988067 | 3.49E-121 | dispersed | |
Lsi01g01277 | Lsi-Chr1:11033086 | Lsi11g00296 | Lsi-Chr11:3063954 | 6.04E-40 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi01g01277 | K09837 | - | csv:101204961 | 983.015 |