Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi01g01480 ATGTTAACTGGTTTCGCTGCAAGCGTGTCTATTGACATTACGGAGATTTCGAAGTACTCGGCCCAGAATATCGAAGACGTCCCTCCGGCTAGTAAAATCCTACCCGCCACCGGGTATCGCCATCACTGCAACCGTGAATATCTCGGCGCCACCTCCTCCACCAGTTCCACACTTCAAAGCGTCAACGAAGAAATGCCAATTCTCCCAATTTCCCTCGCAATTCCAATCCCTCTTCGTCCGCCCTTATTCTCTTTCTCTCAGTCTCTAACTGGTTCAAACCACCTCTCTTACCTTCCCAATCGGATGCCGAACGTTACAAAGACGACAACGCTTATTCGAATGGGCGGAGGTCCTAGAACTTATCCAGGTGGAGTGTCGAAGTGGCAGTGGAAGCGGATGCAGGCCAAGAAAGCTAAGCAGCTGCTTAAGGCCCGGCTGTGCCGCGAACGCCAGATATATGAGATGCGTAAGCGGGCTGAGCTTAAGGCGGCTGTCTCCGAGCTGGAGAGGCCGTGGGAGGTTGTGGAGAAGGCTCCTAATTTGTTCTCTGTTGGCGCCGATGAGCAGGTGAAGGTATTGGCAGATAGGTTTCAGAGGCCTGGTGGATTCGATTTGTGGACGGAAAGAGATGGGCCTCAATTGTTTGAGACGGTTGACGAACTACCTTCCGCAAGGTTTTTCCCGAAAGGAGTGGTTCACAGTGTAAGGCCGTATAGAAGTATTACTGGGTCGGAGAGTTCGTATTCAGAAGCTGGAATTGAAATTGCAACTAGTTTTCAAGAAGATGATTTTAAGACTCACCGGAGTTCTTCTAACCGGAAATTGAGAAGTGGGTCAGTGAATAAAGGGGAGTATAACTCAGATTACTCAGATTACCCATATTACTCGGATACAGAGGATTCCTATCCGAAGCGTTCCTTGGTACCATCAAGTAGTAATGGTAAAAAAGGAAATATATACGAGGGGAGAACCAGGAATCGGGGGACTGAAAGAAACCTGAAGTCTTCTAAGAGAGAGTTGAATCCAGGACAAATTGGATTGGATAGAAGACAAAGAGTTCCTGGTCCTCAGGCGCACAATGGCAATACACAGTATGGAAGAGGCAAGGATTCCAGGCGATCCAAGGGTTCACATTCTGAAGTTTATGATATGAGTTTGGAGCAAGATGGGAGTTACAGATTCCAACCAATGAAAAGTCGGTTAACCTGA 1209 47.97 MLTGFAASVSIDITEISKYSAQNIEDVPPASKILPATGYRHHCNREYLGATSSTSSTLQSVNEEMPILPISLAIPIPLRPPLFSFSQSLTGSNHLSYLPNRMPNVTKTTTLIRMGGGPRTYPGGVSKWQWKRMQAKKAKQLLKARLCRERQIYEMRKRAELKAAVSELERPWEVVEKAPNLFSVGADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPSARFFPKGVVHSVRPYRSITGSESSYSEAGIEIATSFQEDDFKTHRSSSNRKLRSGSVNKGEYNSDYSDYPYYSDTEDSYPKRSLVPSSSNGKKGNIYEGRTRNRGTERNLKSSKRELNPGQIGLDRRQRVPGPQAHNGNTQYGRGKDSRRSKGSHSEVYDMSLEQDGSYRFQPMKSRLT 402
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 12894306 12897956 - Lsi01G014800.1 Lsi01g01480 654138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi01g01480 402 MobiDBLite consensus disorder prediction 366 382 - -
Lsi01g01480 402 PANTHER OS02G0564300 PROTEIN 65 399 - -
Lsi01g01480 402 MobiDBLite consensus disorder prediction 303 319 - -
Lsi01g01480 402 MobiDBLite consensus disorder prediction 273 294 - -
Lsi01g01480 402 MobiDBLite consensus disorder prediction 320 337 - -
Lsi01g01480 402 PANTHER OS02G0564300 PROTEIN 65 399 - -
Lsi01g01480 402 MobiDBLite consensus disorder prediction 262 402 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi01g01480 Lsi-Chr1:12894306 Lsi09g00286 Lsi-Chr9:2985071 2.49E-20 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi01g01480 - - cmo:103490641 560.836