Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi01g01487 | ATGACGGAACAAGTACTGCAGGTGTTTGGTTTCAGGTTAAGTCCGTTCAGTCGGCGAGTGGAGTTGGCTCTCAAACTCAAAGGCCTACGCTACCAATATGTTGAGGAGGACGTGAAGAATAAGAGTCAATTGCTTCTGAAATACAATCCAAGTTACAAGAAGGTCCCTGTGTTGGTTCACAATGGAAACCCCATTGCAGAGTCTCTTGTCATCCTCGAATACATTGATGAAATTTGGAAAACCAACCCTATCCTGCCCCAACATCCCCATCAAAGAGCTCAAGCAAGATTTCTGGCCAAGTATATTGATGACAAGTTTTTTGGTGCATGGAGGAAAGCTATTAGAAGTCAAAGAGAAGGAAGAGAGAAGGTTGTGGAGGCTGTGGAAGAAGCATGCAAGGCATTGGAAGCAGTTGAGAATGAGCTTAAAAGCAACAATAAGTACTTTGGAGGAGACAGCATTGGGTTAGTGGACATTGTAGGCATCTTTATTGGCTATTGGGTTCCTATCATGCAAACAGCTCTTGGCTTTGAAATTCTTAGCAGCCACAGGTTCCCAAAACTAAGCAAATGGAGTGAAGAGCTTATGAGCCATAGCGTTGTCAAGGAGATTCTGCCTCCAACATATGACCTTTTTGCTTATACTCAAACTCATTTTCTAATTACCAAAACTGTGGGTTCTAAGCTGTGA | 690 | 42.9 | MTEQVLQVFGFRLSPFSRRVELALKLKGLRYQYVEEDVKNKSQLLLKYNPSYKKVPVLVHNGNPIAESLVILEYIDEIWKTNPILPQHPHQRAQARFLAKYIDDKFFGAWRKAIRSQREGREKVVEAVEEACKALEAVENELKSNNKYFGGDSIGLVDIVGIFIGYWVPIMQTALGFEILSSHRFPKLSKWSEELMSHSVVKEILPPTYDLFAYTQTHFLITKTVGSKL | 229 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 12961182 | 12963611 | + | Lsi01G014870.1 | Lsi01g01487 | 654145 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi01g01487 | 229 | SFLD | Glutathione Transferase (cytosolic) | 3 | 218 | IPR040079 | - | |
Lsi01g01487 | 229 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 88 | 219 | IPR010987 | - | |
Lsi01g01487 | 229 | CDD | GST_C_Tau | 89 | 214 | IPR045074 | GO:0004364|GO:0006749 | |
Lsi01g01487 | 229 | SUPERFAMILY | Thioredoxin-like | 7 | 107 | IPR036249 | - | |
Lsi01g01487 | 229 | SFLD | Main.3: Omega- and Tau-like | 3 | 218 | IPR045073 | - | |
Lsi01g01487 | 229 | SUPERFAMILY | GST C-terminal domain-like | 77 | 216 | IPR036282 | - | |
Lsi01g01487 | 229 | Coils | Coil | 121 | 145 | - | - | |
Lsi01g01487 | 229 | CDD | GST_N_Tau | 6 | 79 | - | - | |
Lsi01g01487 | 229 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 4 | 83 | IPR004045 | - | |
Lsi01g01487 | 229 | Pfam | Glutathione S-transferase, N-terminal domain | 5 | 77 | IPR004045 | - | |
Lsi01g01487 | 229 | Pfam | Glutathione S-transferase, C-terminal domain | 113 | 198 | IPR004046 | - | |
Lsi01g01487 | 229 | PANTHER | GLUTATHIONE S-TRANSFERASE-RELATED | 6 | 220 | - | - | |
Lsi01g01487 | 229 | Gene3D | - | 85 | 223 | - | - | |
Lsi01g01487 | 229 | Gene3D | Glutaredoxin | 1 | 84 | - | - | |
Lsi01g01487 | 229 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 6 | 220 | IPR045073 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi01g01487 | Lsi-Chr1:12961182 | Lsi01g01490 | Lsi-Chr1:12986980 | 3.83E-82 | dispersed | |
Lsi03g02066 | Lsi-Chr3:31980418 | Lsi01g01487 | Lsi-Chr1:12961182 | 1.54E-11 | dispersed | |
Lsi01g01486 | Lsi-Chr1:12950244 | Lsi01g01487 | Lsi-Chr1:12961182 | 6.15E-134 | tandem | |
Lsi01g01487 | Lsi-Chr1:12961182 | Lsi01g01488 | Lsi-Chr1:12966936 | 9.55E-53 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi01g01487 | K00799 | - | csv:101213782 | 249.98 |