Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi01g01498 | ATGGGAGAAAAAGTGGAGGTGTTTGGGGCATGGTTCAGCCCTTTCAGCCGCCGAGTTGAATTGACTTTGAAGCTGAAAGGCATTGAATATGATTATATTGAAGAAGAAGTATACAATAAAAAGAGCGATTTGTTACTCAAATTCAACCCTGTTTATAAGAAGGTCCCTGTGTTCGTCCATGGCGGAAAACCCATTGCAGAGTCCATTTTTATTCTTCAATACATAGAAGAGACTTGGAAGGATAACCCTATTTTGCCTAAAGACCCTTATCACAAAGCTCTTGCACTCTTTTGGGCCAAGTTCTTGGATCACAAGCTGCTGCCTGCATTAATCAAAGCAAGAAGATCAAGTGAGGGAAAAGAGAGAAAAGAGGCAATAGCAGAGGCAGGGAAAGCATTAAGAGCGCTAGAAGAAGAGCTTAAAGGGAAGAAATTCTTTGGAGGAGAAACATTGGGATTTGTTGACATTGTTGCTAATTTCATAGCATATTGGAGTCCAGCCATGGAAGAAGCTTTGGGTGTTCAAATACTTACCACTCACTTGCAACACCTTCCAAGGCTAAGTCAATGGTGCCATCACTTTCTTCAACATCCCATTGTCAAACACAATCTGCCCCCCAAAACTCAACTCCTTTCTTTCTTTAACTCACAGTTTGGACCCAATAATAATCTTCCTTCCAAATGA | 684 | 41.08 | MGEKVEVFGAWFSPFSRRVELTLKLKGIEYDYIEEEVYNKKSDLLLKFNPVYKKVPVFVHGGKPIAESIFILQYIEETWKDNPILPKDPYHKALALFWAKFLDHKLLPALIKARRSSEGKERKEAIAEAGKALRALEEELKGKKFFGGETLGFVDIVANFIAYWSPAMEEALGVQILTTHLQHLPRLSQWCHHFLQHPIVKHNLPPKTQLLSFFNSQFGPNNNLPSK | 227 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 13061913 | 13064084 | - | Lsi01G014980.1 | Lsi01g01498 | 654156 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi01g01498 | 227 | SFLD | Main.3: Omega- and Tau-like | 2 | 216 | IPR045073 | - | |
Lsi01g01498 | 227 | Gene3D | Glutaredoxin | 1 | 84 | - | - | |
Lsi01g01498 | 227 | PANTHER | GLUTATHIONE S-TRANSFERASE U8 | 1 | 217 | - | - | |
Lsi01g01498 | 227 | SFLD | Main (cytGST) | 2 | 216 | - | - | |
Lsi01g01498 | 227 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 3 | 83 | IPR004045 | - | |
Lsi01g01498 | 227 | SUPERFAMILY | Thioredoxin-like | 4 | 107 | IPR036249 | - | |
Lsi01g01498 | 227 | Pfam | Glutathione S-transferase, C-terminal domain | 108 | 198 | IPR004046 | - | |
Lsi01g01498 | 227 | SUPERFAMILY | GST C-terminal domain-like | 77 | 216 | IPR036282 | - | |
Lsi01g01498 | 227 | CDD | GST_C_Tau | 89 | 215 | IPR045074 | GO:0004364|GO:0006749 | |
Lsi01g01498 | 227 | Pfam | Glutathione S-transferase, N-terminal domain | 4 | 76 | IPR004045 | - | |
Lsi01g01498 | 227 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 88 | 218 | IPR010987 | - | |
Lsi01g01498 | 227 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 1 | 217 | IPR045073 | - | |
Lsi01g01498 | 227 | Gene3D | - | 85 | 221 | - | - | |
Lsi01g01498 | 227 | CDD | GST_N_Tau | 5 | 79 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi01g01489 | Lsi-Chr1:12980972 | Lsi01g01498 | Lsi-Chr1:13061913 | 8.49E-128 | dispersed | |
Lsi01g01498 | Lsi-Chr1:13061913 | Lsi01g01501 | Lsi-Chr1:13090525 | 1.80E-76 | dispersed | |
Lsi01g01498 | Lsi-Chr1:13061913 | Lsi01g01499 | Lsi-Chr1:13066012 | 5.37E-59 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi01g01498 | K00799 | - | csv:101214027 | 392.119 |