Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi01g01583 ATGGAAGACGATTCCTTGCAGAAGGTTGCGATTTCAGGCCCAATCTTAGCCTCTTTGATCCAACGCGTCTCCTCCTCCTCCGGCGCCGTCGACGGCCTTCTTTTCGGCCATGTCTCCGACGTTACCCCCTTATCCCTCTCCGATGATTCATCTTCTTCAACTGACATCCAACCATCAGTACGCGTCGCCACTGTCACCGGATTTCTTTGCTCCGGTACCACCAATAGCTTCTACGACTCTCTCGGACGTGTAGAATCGAAATCGCTTAACCGCCTTCTCGACCGACACCAGACCGACGGCCAAGCTCAACCCCACGATTCTTTGCTAGGTTGGTTTGCCGGCCGCCGGAGGACTCAGCTTCGACCTTCCATGCGTGAATACTTAGTGAGTTCTTCTTTATCTTCGATGAAGCAATTGTCGTTTCCTGTTAAAGACGCTGTGAATCCCACCAATCTAATCCCTAGTGTGTTTATGCTTCTGACTACGCCGCTATCCGATCAAATTATCCACACACATGAGTACCGCGCTTTTCAATTTCGGTCTTCCAATGAGTTCTTTGAGCCGAAATCGATTGACATTGTGAATATTGGGCCGGCATTTCGTGGTCACTATGGATCGTTTACCCCTAATTCTCCTTTCCCCCATTTGCTCTGCGAGACGAGAGCTTCTCCGATGAATGAGGATAAGAATGATGAGAATTTGACTCTGATGAAGCAAAACTCGAAAGATCAGAAGCAAATGAATGTGTGCGCTGAAGGGTTCGAGGTTGGGAACTTGACCCGGTTACTGGGTTCTGAGGCAGCAAATTATACTGCTGGGTTGGAAGATTTGTACGAAAAAATGCTTGTTAAGACTGAGTACTTGGCGCGGCTCGTTGAGAAGAGCTCTGCTCAGGTTCTTGAGCAGGAAAACCACAACAGGAAGTTAAGATATAAAGTTGCGAGGTACCCTGGATTTGAGTAA 963 48.39 MEDDSLQKVAISGPILASLIQRVSSSSGAVDGLLFGHVSDVTPLSLSDDSSSSTDIQPSVRVATVTGFLCSGTTNSFYDSLGRVESKSLNRLLDRHQTDGQAQPHDSLLGWFAGRRRTQLRPSMREYLVSSSLSSMKQLSFPVKDAVNPTNLIPSVFMLLTTPLSDQIIHTHEYRAFQFRSSNEFFEPKSIDIVNIGPAFRGHYGSFTPNSPFPHLLCETRASPMNEDKNDENLTLMKQNSKDQKQMNVCAEGFEVGNLTRLLGSEAANYTAGLEDLYEKMLVKTEYLARLVEKSSAQVLEQENHNRKLRYKVARYPGFE 320
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 14008972 14010235 - Lsi01G015830.1 Lsi01g01583 654241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi01g01583 320 PANTHER OS07G0540200 PROTEIN 1 314 - -
Lsi01g01583 320 PRINTS Protein family FAM175 signature 110 126 IPR023238 -
Lsi01g01583 320 PRINTS Protein family FAM175 signature 31 48 IPR023238 -
Lsi01g01583 320 PRINTS Protein family FAM175 signature 11 29 IPR023238 -
Lsi01g01583 320 PRINTS Protein family FAM175 signature 76 95 IPR023238 -
Lsi01g01583 320 PRINTS Protein family FAM175 signature 190 204 IPR023238 -
Lsi01g01583 320 PANTHER ABRAXAS FAMILY MEMBER 1 314 IPR023238 -
Lsi01g01583 320 PRINTS Plant protein family FAM175 signature 275 301 IPR023241 -
Lsi01g01583 320 PRINTS Plant protein family FAM175 signature 1 21 IPR023241 -
Lsi01g01583 320 PRINTS Plant protein family FAM175 signature 226 246 IPR023241 -
Lsi01g01583 320 PRINTS Plant protein family FAM175 signature 198 218 IPR023241 -
Lsi01g01583 320 PRINTS Plant protein family FAM175 signature 46 70 IPR023241 -
Lsi01g01583 320 PRINTS Plant protein family FAM175 signature 252 272 IPR023241 -
Lsi01g01583 320 PRINTS Plant protein family FAM175 signature 161 181 IPR023241 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Lsi01g01583 Lsi03g02248 CCT
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi01g01583 K20799 - csv:101208097 580.096