Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi01g01658 | ATGGCTCGAAAATCTCCTTCAGTGTTGACCTATTTGCAGCTGCACCTCCGATTTCTCTTCTTCCGGCGTCAATTTTTTTTGTTGATTCCGGCCAATTACTGCTCCTTCTTGTTCGATTTCCAGAGATTAACCATGATTGATGCTATCAAGGCTGCGATCGGCGATGCCGTTCTCACTTCCATGTGGATTTTCTGTGCTTCGTCTCTTGGGGTTCTCACTTCCGTCCTGTACTCGACAGCCGGTGTTTATGGCCTTCCGCTTCACCCGCTTCTTATCACTACTACTCTTGTCTTCGTTCTTGTTTTCGTTTTTAATATAATTGGTGCTGCTTTGGGTGGGGCTAGCTTTAATCCCACTGCTACTGCTGCTTTCTATGCTGCCGGCGTTGGTCCATCCTCTCTCTTCGCCATGGCTATCCGTTTCCCTGCTCAGGCAGCTGGTGCGGTTGCTGGTGCCCTGGCTATCAAGGAGGTGATGCCTATACAATACAAGCACATGCTTGGTGGACCTTCTCTGAAAGTTGACATTCATTCTGGAGCTACAGCTGAAGGAGTTTTGACCTTTATAATCAGTTTTGCTGTTCTTCTAATTGTACTCAGGGGTCCCTCCAGCCCAGTTATTAAAACATGGTTGCTGGCAATGGCCACTGTAGCATTAATCGTTGCTGGTTCTAGTTACACAGGACCTTCCATGAATCCTGCAAATGCGTTTGGATGGGCATATCTAAACAACAGGCATGATACATGGGAGCAGTTGTACAATCATCTTCCCACCACCACCCCCAGCCCCAGCCAAGCAGAAGAAAGCTTGAAATCGGAACCTTCTGATTTACCTATTTTTCTAGACATAGGATTAGAAAACGATGGAGAGCTGGATCCGACTCCCGAAGCACCGCAGTCCTTGAAGGCTCCCGCTGCCTCCAATTCCACCGGAAACGGTCAGATCCGTTACCGATCTCCGTCTTCCGCCGAGCTTCTTGAAGGACAACCCGCTTCTCTTCCACTTCAAGATCAACAGAAGCTACTTCAGTTGGAATTTGACAAGATGCATAAGCGTTCCGGGAAGCAACAGTCGGAATCGTTGTCTAACAAGATCTATAGATTTAGAGGGGTGTTATTGCTTACCTCTCTTTCTCTTTTCTTAATCGCCTTTGTTCTTTATCTCATGCCGGCCCGTGAGGATTACTCCTTCAACCACCGCAAAGTTTCCCCTGATCACAGGTCTTCTTCTTCTTCCAAGACTTCTTTTGCTGTCATTTTTGATGCTGGTAGCTCTGGGAGTCGCGTCCATGTCTTTTGCTTCGATCATAATCTCGATCTCCTCCCCGTTGGCAAGGATATCGAACTTTTCGAACAACTTAAACCAGGACTGAGTGCATATGCTGACAGCCCCAAGGATGCTGCAGCATCTCTAATTTCCCTCTTGGACAAAGCTCAAGACGTGGTTCCAAAAGGGTTGCGGCCAATGACCCCTGTTAGAGTTGGGGCAACTGCTGGCTTGAGGGCCCTGAAAGGTGATGCATCTGATAGAATTTTACAGGCGGTTAGGGATCTCCTGAGAGACAAAAGTGACCTCAGGTTGGAGGGAGAAGATGCCGTCACTGTGATTGATGGAACTCAAGAAGGTTCTTACCTTTGGAATAGGATCATTGAACTTGGCAGCACAATGGAATATGAAGAGGTTGTCGATAAACTACATATGAATTTTAAGCATCATAACAGCATTGAGCAGAATTTGAGACGGAAATATGTTCAATTGGAGATTGTGACGTTAAACTATCTGCTTGGGAACTTGGGTAAGAAATATTCGGATACAGTTGGAGTTGTAGATCTTGGGGGAGGATCTGTTCAAATGGCATATGCTATCTCAGAAAAGGATGCTGCTCGATTATCAGATGTAGAGGGTGCATACGTCAAAAAGATGTATCTGAAGGGAGCAACTTATTATCTCTATGTTCACAGTTATTTGCACTATGGGTTACTAGCTGCTCGAGCAGAGGTTTTGAGTGTCTCTGAAGATTCTAACAATGATTGCATTTTATCTGGCTATGAAGGAGAATACCATTACGGAGGAAAGGACTACAAAGCATCAGCCTCTTCATCAGGGTCTAGCTTGAATGGATGCAGGAGTACAGTTTTGAAGGCCCTCAAGGTTAATGAATCCACGTGTACTCACATGAAGTGCACTTTTGGTGGTGTTTGGAATGGCGGAGGAGGAGACGGCCAGAAGAATCTCTTCGTTGCTTCATTTTTCTTTGACAGGGCAGCTGAGGCTGGTTTTGCTGACCCCAATAAGCCGGTTGCTAAAGTTCGCCCCGCAGACTTCAATGATGCAGCGAAACAGGCATGCCAAATCAAAGTCGAGGATGCCAGTACATATCCGAATGTCGAGAAGGATAACCTGCCGTATTTGTGTATGGATCTTGTGTATCAGTACACACTACTCGTAGATGGATTCGGGCTGGATCCCTGGCAAGAGATCACATTGGTGAAGAAGGTTAAATATCAGAACTCCTTGGTTGAAGCAGCATGGCCTCTAGGCAGTGCCATCGAAGCTGTCTCGTCGTTAGCCTAA | 2574 | 46.39 | MARKSPSVLTYLQLHLRFLFFRRQFFLLIPANYCSFLFDFQRLTMIDAIKAAIGDAVLTSMWIFCASSLGVLTSVLYSTAGVYGLPLHPLLITTTLVFVLVFVFNIIGAALGGASFNPTATAAFYAAGVGPSSLFAMAIRFPAQAAGAVAGALAIKEVMPIQYKHMLGGPSLKVDIHSGATAEGVLTFIISFAVLLIVLRGPSSPVIKTWLLAMATVALIVAGSSYTGPSMNPANAFGWAYLNNRHDTWEQLYNHLPTTTPSPSQAEESLKSEPSDLPIFLDIGLENDGELDPTPEAPQSLKAPAASNSTGNGQIRYRSPSSAELLEGQPASLPLQDQQKLLQLEFDKMHKRSGKQQSESLSNKIYRFRGVLLLTSLSLFLIAFVLYLMPAREDYSFNHRKVSPDHRSSSSSKTSFAVIFDAGSSGSRVHVFCFDHNLDLLPVGKDIELFEQLKPGLSAYADSPKDAAASLISLLDKAQDVVPKGLRPMTPVRVGATAGLRALKGDASDRILQAVRDLLRDKSDLRLEGEDAVTVIDGTQEGSYLWNRIIELGSTMEYEEVVDKLHMNFKHHNSIEQNLRRKYVQLEIVTLNYLLGNLGKKYSDTVGVVDLGGGSVQMAYAISEKDAARLSDVEGAYVKKMYLKGATYYLYVHSYLHYGLLAARAEVLSVSEDSNNDCILSGYEGEYHYGGKDYKASASSSGSSLNGCRSTVLKALKVNESTCTHMKCTFGGVWNGGGGDGQKNLFVASFFFDRAAEAGFADPNKPVAKVRPADFNDAAKQACQIKVEDASTYPNVEKDNLPYLCMDLVYQYTLLVDGFGLDPWQEITLVKKVKYQNSLVEAAWPLGSAIEAVSSLA | 857 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 15143731 | 15157294 | - | Lsi01G016580.1 | Lsi01g01658 | 654316 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi01g01658 | 857 | PRINTS | Major intrinsic protein family signature | 97 | 121 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Lsi01g01658 | 857 | PRINTS | Major intrinsic protein family signature | 136 | 155 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Lsi01g01658 | 857 | PRINTS | Major intrinsic protein family signature | 213 | 235 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Lsi01g01658 | 857 | PRINTS | Major intrinsic protein family signature | 182 | 200 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Lsi01g01658 | 857 | PRINTS | Major intrinsic protein family signature | 50 | 69 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Lsi01g01658 | 857 | SUPERFAMILY | Aquaporin-like | 41 | 246 | IPR023271 | - | |
Lsi01g01658 | 857 | MobiDBLite | consensus disorder prediction | 301 | 317 | - | - | |
Lsi01g01658 | 857 | PANTHER | APYRASE-LIKE PROTEIN | 350 | 550 | - | - | |
Lsi01g01658 | 857 | Gene3D | Glycerol uptake facilitator protein. | 41 | 261 | IPR023271 | - | |
Lsi01g01658 | 857 | PANTHER | ADENOSINE/GUANOSINE DIPHOSPHATASE | 350 | 550 | IPR000407 | GO:0016787 | |
Lsi01g01658 | 857 | PANTHER | ADENOSINE/GUANOSINE DIPHOSPHATASE | 588 | 855 | IPR000407 | GO:0016787 | |
Lsi01g01658 | 857 | MobiDBLite | consensus disorder prediction | 291 | 317 | - | - | |
Lsi01g01658 | 857 | Gene3D | Exopolyphosphatase. Domain 2 | 586 | 834 | - | - | |
Lsi01g01658 | 857 | Pfam | Major intrinsic protein | 45 | 247 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Lsi01g01658 | 857 | Gene3D | - | 412 | 563 | - | - | |
Lsi01g01658 | 857 | PANTHER | APYRASE-LIKE PROTEIN | 588 | 855 | - | - | |
Lsi01g01658 | 857 | Pfam | GDA1/CD39 (nucleoside phosphatase) family | 411 | 548 | IPR000407 | GO:0016787 | |
Lsi01g01658 | 857 | Pfam | GDA1/CD39 (nucleoside phosphatase) family | 589 | 855 | IPR000407 | GO:0016787 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi01g01658 | Lsi-Chr1:15143731 | Lsi06g00717 | Lsi-Chr6:11923981 | 1.04E-126 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi01g01658 | K14641 | - | csv:101220305 | 849.736 |