Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi01g01756 ATGAGGAGGCGGAGATTCGAAACTCCGACCTCAAGGATAACAAGTGGCACAATGCTGTCGTATGCCTCCTCCCTTCAAAAGTTTTGCCTTAGAGGTGAGAAGCCTCACCATGCAAATAAGAAAAAGGAAGAAAGTCATGATATAGTAGCAACATTCAATGTTGAGAGACCGGTTTCTTTGCTGGAAGACAATATCGAGCAACTCCAAACCGACATTTTTGAAGAGTTCCCTATACCTTCTATCAAAGTGGATATACTATCTCTAGAACCATTATCTGGATCCAACCGTACAAAAGTTGTGTTCAGCCTCGATCCAGATGGCGATGACTTGGAAATCTCGTCAACTTATCTAAGTTTAATCAGGTCAACCATTGCAAGTCTAGTAACGAATCAGTTCCTCCGCATTACTAAATCCATGTTTGGGGAGGCTTTTTCGTTTGAAGTACTGAAATTCCCCAGAGGAATAACTATAATCCCGCCACAGAGTGCATTTCTTTTGCAGAAAGTGCAAATTCTTTTCAACTTTACGTTGAACTTCTCTATTCATCAGATTCAAGTACATTTCAGTGAACTGACCAGCCAACTGGAGGCGGGATTACGACTAGCTCCATATGAGATTTTATATATTAAGCTGTGGAATGCAGAAGGTTCGACTGTGACTGCCCCTACGATTGTCCAGTCGTCTGTACTTCTTGAAGTTGGAAATACTCCATCAATGCGACGGCTGAAGCAGCTAGCTCAAACAATCTCAGGTTCTAATTCTAGCAATCTCGGTCTGAATAATACGGAGTTTGGAAAGGTGAAGCAAGTTCGCCTTTCGTCGATTCTTAAATACTCCCTCAATGGGAGTGACGGGAACGGCCCCGCAAGGTCACCTTCTCCTGCTCCTGCACCCCAGTCCCATAACTACCCTCATCCCCCGACTCACCACCATCACCACCATCACACCCCTCTAACCCCTGCAATTTCACCTGCCCCTGCAACCGAGAAGGGTGCACCAGAATACAGTTCGCCTGCCCCTGAAAGAAGCGCAGCATCACCTAAGAGAAGTTACGCGGCAAAGCCGCCTGGTTGTCAGTATAGATACAAGAGGAAGTCTGGTAGGAAAGAAGGAAAGCAATCTCATTTAACCCCGCTTGCTTCACCCATTATATCTCCTGATCATTCTGCTGCATCGCCATCGCCATCGCCACAACATCAAGTAAACCCACCAGCAGCACCCGTCTCTCGAGCTCCGGCATTAACTCCATTGCCAAATGTCGTTTACGCTCATGTTCAACCACCTTCCAAAAGCGACTCCAGCCACCCGGAAAAATCCACGACAAATCCATTAGTTGCGCCATCTCCATCTCCATGTGAGTAA 1362 46.26 MRRRRFETPTSRITSGTMLSYASSLQKFCLRGEKPHHANKKKEESHDIVATFNVERPVSLLEDNIEQLQTDIFEEFPIPSIKVDILSLEPLSGSNRTKVVFSLDPDGDDLEISSTYLSLIRSTIASLVTNQFLRITKSMFGEAFSFEVLKFPRGITIIPPQSAFLLQKVQILFNFTLNFSIHQIQVHFSELTSQLEAGLRLAPYEILYIKLWNAEGSTVTAPTIVQSSVLLEVGNTPSMRRLKQLAQTISGSNSSNLGLNNTEFGKVKQVRLSSILKYSLNGSDGNGPARSPSPAPAPQSHNYPHPPTHHHHHHHTPLTPAISPAPATEKGAPEYSSPAPERSAASPKRSYAAKPPGCQYRYKRKSGRKEGKQSHLTPLASPIISPDHSAASPSPSPQHQVNPPAAPVSRAPALTPLPNVVYAHVQPPSKSDSSHPEKSTTNPLVAPSPSPCE 453
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 16339827 16344309 + Lsi01G017560.1 Lsi01g01756 654414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi01g01756 453 MobiDBLite consensus disorder prediction 426 447 - -
Lsi01g01756 453 MobiDBLite consensus disorder prediction 279 453 - -
Lsi01g01756 453 PANTHER F20B24.21 34 450 - -
Lsi01g01756 453 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 34 450 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Lsi01g01756 Lsi03g01619 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi01g01756 Lsi-Chr1:16339827 Lsi03g01619 Lsi-Chr3:27300663 9.62E-100 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi01g01756 - - bhj:120073837 653.669