Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi01g01891 | ATGGCGGATTTCCAAAGCTACATAATTCTCTTCCTCATATGGTTAGTTTCCACCTTCACAATTCGCTTAATCTTTACCAAAAACAAACATAAGTCTCGTCTTCCTCCAAGCCCTTTTGCTCTCCCCATCATCGGCCATCTCCATCTCCTCAGTCCGTCGCCCCACAAAGCTTTCCACAAGCTCTCGACCCGCCATGGACCACTAATGCACCTCCGTTTAGGATCGGTCCCTTGCATCGTAGTTTCGTCACCCGAAACAGCGAAACAAATCCTCAAAACACATGAATCTTCCTTCTCCAACAGACCCCATTTGTCAGCAGTTGACTATCTAACCTATGGCTCAGCTGATTTCTCCTTTGCTCCCTATGGACCTTATTGGAAGTTCATGAAGAAACTTTGTATGTCGGAGCTCCTCGGCGGTAGGACGCTCAACAGCCTCTGCCCCATGAGAGAGGACGAGAGACGGCGGTTTCTACGGTCGCTGCAATCGAAGGCGGAGGAGGGGAAAGAAGTTGATGTTGGAGGAGAGTTGATGAGGTTGAGCAACAATGTGATATCTAGAATGACATTGGGGAAAAGATGTGCTGAGGAAGAAGAAGAGGCTAAGGGGATAAGAAAATTGGTGAAGGATATAGCTGTACTTTCAGGGACTTTTAATGTCTCAGATTATATTTGGTTTTGTAAAAATTTGGACTTGCAAAGGCTTGGGAAGAGGCTTAAGGAAGTTCATGAGAGGTTTGATGAGATGATGGAGAGAATGATAAAAGAACATGAAGAGAATAGTGGTGATGAGAAAGTGAAGGATTTGCTTGATATTTTGCTTCTTAAGTTTGGAGATCAAAACTCAGAGGTCAAGTTGACTAAAGAGAACATTAAGGCCTTTGTTCTGGACATATTTGCAGCAGGGACAGACACATCAGCAATAACAACAGAATGGGCATTAGCAGAGCTAATAAACCATCCAAACATAATGGAGAAAGCAAGAGAAGAAGTTCACAGAGTTGTAGGAAAGAACAAAGTGATTGAGGAATCAGACATTGCCAATCTTCCCTATCTCCAAGCAATAGTAAAAGAGACATTAAGGCTTCACTCAAGCCCATTGATAGTGAGGGAATCAACTGAGAGTTGCACAATAAGTGGTTATGAGATAGCAGCAAAAACTCAAGTTTATGTGAATGTTTGGGCCATTGGGAGAGACCCAAATCATTGGGAAAATCCTCTTGAGTTTAAGCCAGAAAGGTTTATGGACAAAGAAGGGAGTGTGAATAGTGGTGATTTGAGAGGGCAGAATTTTCAGTTGTTGCCATTTGGGAGTGGAAGAAGAAGCTGTCCTGGAATAACTCTTGCTTTGCTAATGGTTCAGACAACTTTGGGTTGTATGATTCAATGCTTTGATTGGAAGGTTAATGGAGAAAATGGGAAAGTTGATATGGAAGAAGGCCCTGGCCTTACACTTCCTAGGGCACACCCTTTGGTTTGTGTTCCAAACCCTTTGATTAAAGCCATATGA | 1509 | 43.07 | MADFQSYIILFLIWLVSTFTIRLIFTKNKHKSRLPPSPFALPIIGHLHLLSPSPHKAFHKLSTRHGPLMHLRLGSVPCIVVSSPETAKQILKTHESSFSNRPHLSAVDYLTYGSADFSFAPYGPYWKFMKKLCMSELLGGRTLNSLCPMREDERRRFLRSLQSKAEEGKEVDVGGELMRLSNNVISRMTLGKRCAEEEEEAKGIRKLVKDIAVLSGTFNVSDYIWFCKNLDLQRLGKRLKEVHERFDEMMERMIKEHEENSGDEKVKDLLDILLLKFGDQNSEVKLTKENIKAFVLDIFAAGTDTSAITTEWALAELINHPNIMEKAREEVHRVVGKNKVIEESDIANLPYLQAIVKETLRLHSSPLIVRESTESCTISGYEIAAKTQVYVNVWAIGRDPNHWENPLEFKPERFMDKEGSVNSGDLRGQNFQLLPFGSGRRSCPGITLALLMVQTTLGCMIQCFDWKVNGENGKVDMEEGPGLTLPRAHPLVCVPNPLIKAI | 502 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 21807366 | 21809756 | - | Lsi01G018910.1 | Lsi01g01891 | 654549 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi01g01891 | 502 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 436 | 445 | IPR017972 | GO:0005506|GO:0016705 | |
Lsi01g01891 | 502 | Coils | Coil | 232 | 252 | - | - | |
Lsi01g01891 | 502 | Gene3D | Cytochrome P450 | 20 | 493 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi01g01891 | 502 | PRINTS | E-class P450 group I signature | 86 | 107 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi01g01891 | 502 | PRINTS | E-class P450 group I signature | 443 | 466 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi01g01891 | 502 | PRINTS | E-class P450 group I signature | 180 | 198 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi01g01891 | 502 | PRINTS | E-class P450 group I signature | 62 | 81 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi01g01891 | 502 | PRINTS | E-class P450 group I signature | 310 | 336 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi01g01891 | 502 | PRINTS | E-class P450 group I signature | 392 | 416 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi01g01891 | 502 | PRINTS | E-class P450 group I signature | 433 | 443 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi01g01891 | 502 | PRINTS | E-class P450 group I signature | 290 | 307 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi01g01891 | 502 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 5 | 500 | - | - | |
Lsi01g01891 | 502 | Pfam | Cytochrome P450 | 35 | 493 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi01g01891 | 502 | PRINTS | P450 superfamily signature | 354 | 365 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi01g01891 | 502 | PRINTS | P450 superfamily signature | 301 | 318 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi01g01891 | 502 | PRINTS | P450 superfamily signature | 434 | 443 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi01g01891 | 502 | PRINTS | P450 superfamily signature | 443 | 454 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi01g01891 | 502 | SUPERFAMILY | Cytochrome P450 | 28 | 495 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi01g01891 | 502 | PANTHER | CYTOCHROME P450 93A2 | 5 | 500 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi01g01891 | Lsi-Chr1:21807366 | Lsi03g01218 | Lsi-Chr3:22737963 | 2.46E-107 | dispersed | |
Lsi03g01219 | Lsi-Chr3:22754816 | Lsi01g01891 | Lsi-Chr1:21807366 | 2.12E-82 | dispersed | |
Lsi03g01220 | Lsi-Chr3:22757413 | Lsi01g01891 | Lsi-Chr1:21807366 | 2.54E-42 | dispersed | |
Lsi03g01714 | Lsi-Chr3:28510341 | Lsi01g01891 | Lsi-Chr1:21807366 | 8.80E-117 | dispersed | |
Lsi09g00352 | Lsi-Chr9:3673185 | Lsi01g01891 | Lsi-Chr1:21807366 | 1.19E-90 | dispersed | |
Lsi01g01891 | Lsi-Chr1:21807366 | Lsi03g01713 | Lsi-Chr3:28504346 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi01g01891 | K24188 | - | csv:101213143 | 903.279 |